1. Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment. Issue 12 (25th October 2019) Authors: Lensink, Marc F.; Brysbaert, Guillaume; Nadzirin, Nurul; Velankar, Sameer; Chaleil, Raphaël A. G.; Gerguri, Tereza; Bates, Paul A.; Laine, Elodie; Carbone, Alessandra; Grudinin, Sergei; Kong, Ren; Liu, Ran‐Ran; Xu, Xi‐Ming; Shi, Hang; Chang, Shan; Eisenstein, Miriam; Karczynska, Agnieszka; Czaple... Journal: Proteins Issue: Volume 87:Issue 12(2019) Page Start: 1200 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38‐46. Issue 8 (25th November 2019) Authors: Christoffer, Charles; Terashi, Genki; Shin, Woong‐Hee; Aderinwale, Tunde; Maddhuri Venkata Subramaniya, Sai Raghavendra; Peterson, Lenna; Verburgt, Jacob; Kihara, Daisuke Journal: Proteins Issue: Volume 88:Issue 8(2020) Page Start: 948 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Enhancement for MAINMAST, De Novo Main-Chain Tracing Method: Symmetric Multi-Chain Modeling, Local Refinement, and Graphical User Interface. (August 2019) Authors: Terashi, Genki; Zha, Yuhong; Kihara, Daisuke Journal: Microscopy and microanalysis Issue: Volume 25:(2022)Supplement 2 Page Start: 146 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. SHREC 2020: Multi-domain protein shape retrieval challenge. (October 2020) Authors: Langenfeld, Florent; Peng, Yuxu; Lai, Yu-Kun; Rosin, Paul L.; Aderinwale, Tunde; Terashi, Genki; Christoffer, Charles; Kihara, Daisuke; Benhabiles, Halim; Hammoudi, Karim; Cabani, Adnane; Windal, Feryal; Melkemi, Mahmoud; Giachetti, Andrea; Mylonas, Stelios; Axenopoulos, Apostolos; Daras, Petros;... Journal: Computers & graphics Issue: Volume 91(2020) Page Start: 189 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Human and server docking prediction for CAPRI round 30‐35 using LZerD with combined scoring functions. Issue 3 (14th October 2016) Authors: Peterson, Lenna X.; Kim, Hyungrae; Esquivel‐Rodriguez, Juan; Roy, Amitava; Han, Xusi; Shin, Woong‐Hee; Zhang, Jian; Terashi, Genki; Lee, Matt; Kihara, Daisuke Journal: Proteins Issue: Volume 85:Issue 3(2017) Page Start: 513 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Genotype & phenotype in Lowe Syndrome: specific OCRL1 patient mutations differentially impact cellular phenotypes. Issue 3 (30th January 2021) Authors: Ramadesikan, Swetha; Skiba, Lisette; Lee, Jennifer; Madhivanan, Kayalvizhi; Sarkar, Daipayan; De La Fuente, Agustina; Hanna, Claudia B; Terashi, Genki; Hazbun, Tony; Kihara, Daisuke; Aguilar, R Claudio Journal: Human molecular genetics Issue: Volume 30:Issue 3/4(2021) Page Start: 198 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions. Issue 11 (23rd August 2013) Authors: Moretti, Rocco; Fleishman, Sarel J.; Agius, Rudi; Torchala, Mieczyslaw; Bates, Paul A.; Kastritis, Panagiotis L.; Rodrigues, João P. G. L. M.; Trellet, Mikaël; Bonvin, Alexandre M. J. J.; Cui, Meng; Rooman, Marianne; Gillis, Dimitri; Dehouck, Yves; Moal, Iain; Romero‐Durana, Miguel; Perez‐Cano, L... Journal: Proteins Issue: Volume 81:Issue 11(2013) Page Start: 1980 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Protein model refinement for cryo‐EM maps using AlphaFold2 and the DAQ score. Issue 1 (20th December 2022) Authors: Terashi, Genki; Wang, Xiao; Kihara, Daisuke Journal: Acta crystallographica Issue: Volume 79:Issue 1(2023) Page Start: 10 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Protein structure model refinement in CASP12 using short and long molecular dynamics simulations in implicit solvent. (1st September 2017) Authors: Terashi, Genki; Kihara, Daisuke Journal: Proteins Issue: Volume 86(2017)Supplement 1 Page Start: 189 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment. Issue 12 (13th September 2021) Authors: Lensink, Marc F.; Brysbaert, Guillaume; Mauri, Théo; Nadzirin, Nurul; Velankar, Sameer; Chaleil, Raphael A. G.; Clarence, Tereza; Bates, Paul A.; Kong, Ren; Liu, Bin; Yang, Guangbo; Liu, Ming; Shi, Hang; Lu, Xufeng; Chang, Shan; Roy, Raj S.; Quadir, Farhan; Liu, Jian; Cheng, Jianlin; Antoniak, Anna Other Names: Moult John guestEditor.; Kryshtafovych Andriy guestEditor. Journal: Proteins Issue: Volume 89:Issue 12(2021) Page Start: 1800 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗