1. A Caenorhabditis elegans Model for Integrating the Functions of Neuropsychiatric Risk Genes Identifies Components Required for Normal Dendritic Morphology. Issue 5 (1st May 2020) Authors: Aguirre-Chen, Cristina; Stec, Natalia; Ramos, Olivia Mendivil; Kim, Nuri; Kramer, Melissa; McCarthy, Shane; Gillis, Jesse; McCombie, W Richard; Hammell, Christopher M Journal: G3 Issue: Volume 10:Issue 5(2020) Page Start: 1617 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. An expanded evaluation of protein function prediction methods shows an improvement in accuracy. Issue 1 (December 2016) Authors: Jiang, Yuxiang; Oron, Tal Ronnen; Clark, Wyatt T.; Bankapur, Asma R.; D'Andrea, Daniel; Lepore, Rosalba; Funk, Christopher S.; Kahanda, Indika; Verspoor, Karin M.; Ben-Hur, Asa; Koo, Da Chen Emily; Penfold-Brown, Duncan; Shasha, Dennis; Youngs, Noah; Bonneau, Richard; Lin, Alexandra; Sahraeian, S... Journal: Genome biology Issue: Volume 17:Issue 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Co-expression in Single-Cell Analysis: Saving Grace or Original Sin?. Issue 11 (November 2018) Authors: Crow, Megan; Gillis, Jesse Journal: Trends in genetics Issue: Volume 34:Issue 11(2018) Page Start: 823 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. CoCoCoNet: conserved and comparative co-expression across a diverse set of species. Issue Volume 48:Issue W1(2020) (11th May 2020) Authors: Lee, John; Shah, Manthan; Ballouz, Sara; Crow, Megan; Gillis, Jesse Journal: Nucleic acids research Issue: Volume 48:Issue W1(2020) Page Start: W566 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Coexpression reveals conserved gene programs that co-vary with cell type across kingdoms. Issue 8 (22nd April 2022) Authors: Crow, Megan; Suresh, Hamsini; Lee, John; Gillis, Jesse Journal: Nucleic acids research Issue: Volume 50:Issue 8(2022) Page Start: 4302 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Conserved cell‐type specific signature of resilience to Alzheimer's disease nominates role for excitatory cortical neurons. (20th December 2022) Authors: Telpoukhovskaia, Maria; Hadad, Niran; Gurdon, Brianna; Dai, Miko; Ouellette, Andrew R; Neuner, Sarah; Dunn, Amy R; Hansen, Shania L; Wu, Yiyang; Dumitrescu, Logan; O'Connell, Kristen MS; Dammer, Eric B; Seyfried, Nicholas T.; Muzumdar, Sukalp; Gillis, Jesse; Robson, Paul; Zhang, Jigang; Hohman, T... Journal: Alzheimer's & dementia Issue: Volume 18(2022)Supplement 4 Page Start: n/a Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Exploiting single-cell expression to characterize co-expression replicability. Issue 1 (December 2016) Authors: Crow, Megan; Paul, Anirban; Ballouz, Sara; Huang, Z.; Gillis, Jesse Journal: Genome biology Issue: Volume 17:Issue 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Gene-specific patterns of expression variation across organs and species. Issue 1 (December 2016) Authors: Breschi, Alessandra; Djebali, Sarah; Gillis, Jesse; Pervouchine, Dmitri; Dobin, Alex; Davis, Carrie; Gingeras, Thomas; Guigó, Roderic Journal: Genome biology Issue: Volume 17:Issue 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Learning single-cell chromatin accessibility profiles using meta-analytic marker genes. Issue 1 (22nd December 2022) Authors: Kawaguchi, Risa Karakida; Tang, Ziqi; Fischer, Stephan; Rajesh, Chandana; Tripathy, Rohit; Koo, Peter K; Gillis, Jesse Journal: Briefings in bioinformatics Issue: Volume 24:Issue 1(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Single cell RNA-sequencing: replicability of cell types. (June 2019) Authors: Crow, Megan; Gillis, Jesse Journal: Current opinion in neurobiology Issue: Volume 56(2019) Page Start: 69 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗