Transcriptome data‐based identification of candidate genes involved in metabolism and accumulation of soluble sugars during fruit development in 'Huangguan' plum. Issue 9 (2nd August 2021)

• Record Type: Journal Article
• Authors: Yu, Xinmiao; Ali, Muhammad Moaaz; Li, Binqi; Fang, Ting; Chen, Faxing
• Is Part Of: Journal of food biochemistry. Volume 45:Issue 9(2021)
• Page Start: n/a
• Page End: n/a
• Publication Date: 2021-08-02
• Subjects: HPLC -- qRT‐PCR -- RNA‐Seq -- soluble sugars -- sorbitol; Food -- Analysis -- Periodicals; Food -- Composition -- Periodicals; Biochemistry -- Periodicals; 664.024
• DOI: 10.1111/jfbc.13878
• Languages: English
• ISSNs: 0145-8884

Abstract

Abstract: Fruit sweetness being an important factor of organoleptic quality directly affects the consumers' preferences for fresh fruit consumption, and is influenced by the composition and quantity of sugars. In this study, four soluble sugars (sucrose, fructose, glucose, and sorbitol) were identified and quantified in plum fruits cv. 'Huangguan' at four different maturity stages (fruitlet, green, veraison, and mature stage). The results revealed that sucrose and glucose are major soluble sugar components at the fruitlet and mature stages, respectively. RNA‐Seq analysis was carried out and 6, 778 differentially expressed genes (DEGs) were identified, including 121 genes involved in sugar metabolism. Furthermore, a total of 39 transcripts of 8 gene families encoding key enzymes related to the metabolism and accumulation of soluble sugars were separately identified. ERD6L (gene 103322904) was involved in keeping a balance of glucose between the inside and outside of vacuole. SS (gene 103333990) and SDH (gene 103335104) regulated the accumulation of fructose at the green stage. SDH (gene 103335104) controlled the degradation of sorbitol at the green stage. SS (gene 103333990) and PFK (gene 103333391) regulated the degradation of sucrose at the early stages of fruit development. Moreover, NINV (gene 103331108) regulated the accumulation of total sugar in plum. Genes 103321334 and 103335689 were important bZIP transcription factors that regulate the accumulation of glucose and fructose in fruits. Twelve DEGs were selected and validated to observe the relative accuracy of transcriptome sequencing data using qRT‐PCR. Gene expression patterns were consistent between qRT‐PCR and RNA‐Seq data, indicating the reliability of RNA‐Seq data. Practical applications: The results of this study provided new insights into comprehensive understanding of the genetic control of sugar metabolism and accumulation in plum fruits. Abstract : RNA‐Seq analysis of plum fruit samples was carried out at four different maturity stages, and 6, 778 differentially expressed genes (DEGs) were identified, including 121 genes involved in sugar metabolism. The 39 transcripts of 8 gene families, including five SSs, four SPSs, ten INVs, one HK, one FK, nine SWEETs, six MSTs and three SUCs that encode key enzymes related to the metabolism and accumulation of soluble sugars were separately identified. Twelve DEGs were selected and validated to observe the relative accuracy of transcriptome sequencing data using qRT‐PCR.