211. Using ProteomeScout: A Resource of Post‐Translational Modifications, Their Experiments, and the Proteins That They Annotate. Issue 1 (13th February 2018) Authors: Mooradian, Arshag D.; Held, Jason M.; Naegle, Kristen M. Editors: Baxevanis, Andreas D.; Petsko, Gregory A.; Stein, Lincoln D.; Stormo, Gary D. Journal: Current protocols in bioinformatics Issue: Volume 59:Issue 1(2017) Page Start: 13.32.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
212. Using PSEA‐Quant for Protein Set Enrichment Analysis of Quantitative Mass Spectrometry‐Based Proteomics. Issue 1 (24th March 2016) Authors: Lavallée‐Adam, Mathieu; Yates, John R. Editors: Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R. Journal: Current protocols in bioinformatics Issue: Volume 53:Issue 1(2016) Page Start: 13.28.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
213. Using RAxML to Infer Phylogenies. Issue 1 (3rd September 2015) Authors: Stamatakis, Alexandros Editors: Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R. Journal: Current protocols in bioinformatics Issue: Volume 51:Issue 1(2015) Page Start: 6.14.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
214. Using REDItools to Detect RNA Editing Events in NGS Datasets. Issue 1 (15th February 2018) Authors: Picardi, Ernesto; D'Erchia, Anna Maria; Montalvo, Antonio; Pesole, Graziano Editors: Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R. Journal: Current protocols in bioinformatics Issue: Volume 49:Issue 1(2015) Page Start: 12.12.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
215. Using RegulonDB, the Escherichia coli K‐12 Gene Regulatory Transcriptional Network Database. Issue 1 (9th April 2018) Authors: Salgado, Heladia; Martínez‐Flores, Irma; Bustamante, Víctor H.; Alquicira‐Hernández, Kevin; García‐Sotelo, Jair S.; García‐Alonso, Delfino; Collado‐Vides, Julio Editors: Baxevanis, Andreas D.; Petsko, Gregory A.; Stein, Lincoln D.; Stormo, Gary D. Journal: Current protocols in bioinformatics Issue: Volume 61:Issue 1(2018) Page Start: 1.32.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
216. Using SOAPaligner for Short Reads Alignment. Issue 1 (12th December 2013) Authors: Gu, Shengchang; Fang, Lin; Xu, Xun Editors: Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R. Journal: Current protocols in bioinformatics Issue: Volume 44:Issue 1(2013) Page Start: 11.11.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
217. Using SomaticSniper to Detect Somatic Single Nucleotide Variants. Issue 1 (21st March 2014) Authors: Larson, David E.; Abbott, Travis E.; Wilson, Richard K. Editors: Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R. Journal: Current protocols in bioinformatics Issue: Volume 45:Issue 1(2014) Page Start: 15.5.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
218. Using SPAdes De Novo Assembler. Issue 1 (19th June 2020) Authors: Prjibelski, Andrey; Antipov, Dmitry; Meleshko, Dmitry; Lapidus, Alla; Korobeynikov, Anton Editors: Baxevanis, Andreas D.; Petsko, Gregory A.; Stein, Lincoln D.; Stormo, Gary D. Journal: Current protocols in bioinformatics Issue: Volume 70:Issue 1(2020) Page Start: n/a Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
219. Using SQL Databases for Sequence Similarity Searching and Analysis. Issue 1 (13th February 2018) Authors: Pearson, William R.; Mackey, Aaron J. Editors: Baxevanis, Andreas D.; Petsko, Gregory A.; Stein, Lincoln D.; Stormo, Gary D. Journal: Current protocols in bioinformatics Issue: Volume 59:Issue 1(2017) Page Start: 9.4.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
220. Using the Arabidopsis Information Resource (TAIR) to Find Information About Arabidopsis Genes. Issue 1 (8th December 2017) Authors: Reiser, Leonore; Subramaniam, Shabari; Li, Donghui; Huala, Eva Editors: Bateman, Alex; Pearson, William R.; Stein, Lincoln D.; Stormo, Gary D.; Yates, John R. Journal: Current protocols in bioinformatics Issue: Volume 60:Issue 1(2017) Page Start: 1.11.1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗