1. A comprehensive evaluation of binning methods to recover human gut microbial species from a non-redundant reference gene catalog. (1st March 2021) Authors: Borderes, Marianne; Gasc, Cyrielle; Prestat, Emmanuel; Galvão Ferrarini, Mariana; Vinga, Susana; Boucinha, Lilia; Sagot, Marie-France Journal: NAR genomics and bioinformatics Issue: Volume 3:issue 1(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Assessing the Exceptionality of Coloured Motifs in Networks. (26th October 2008) Authors: Schbath, Sophie; Lacroix, Vincent; Sagot, Marie-France Other Names: Repsilber Dirk Academic Editor. Journal: EURASIP journal on bioinformatics and systems biology Issue: Volume 2009(2009) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. BRASERO: A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. (21st May 2012) Authors: Allali, Julien; Saule, Cédric; Chauve, Cédric; d'Aubenton-Carafa, Yves; Denise, Alain; Drevet, Christine; Ferraro, Pascal; Gautheret, Daniel; Herrbach, Claire; Leclerc, Fabrice; de Monte, Antoine; Ouangraoua, Aida; Sagot, Marie-France; Termier, Michel; Thermes, Claude; Touzet, Hélène Other Names: Schäffer Alejandro Academic Editor. Journal: Advances in bioinformatics Issue: Volume 2012(2012) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data. (25th October 2022) Authors: Moraga, Carol; Sanchez, Evelyn; Ferrarini, Mariana Galvão; Gutierrez, Rodrigo A; Vidal, Elena A; Sagot, Marie-France Journal: GigaScience Issue: Volume 11(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. DegreeCox – a network-based regularization method for survival analysis. Issue 16 (December 2016) Authors: Veríssimo, André; Oliveira, Arlindo Limede; Sagot, Marie-France; Vinga, Susana Journal: BMC bioinformatics Issue: Volume 17:Issue 16(2016) Page Start: 109 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. DegreeCox – a network-based regularization method for survival analysis. Issue 16 (December 2016) Authors: Veríssimo, André; Oliveira, Arlindo Limede; Sagot, Marie-France; Vinga, Susana Journal: BMC bioinformatics Issue: Volume 17:Issue 16(2016) Page Start: 109 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Enumeration of minimal stoichiometric precursor sets in metabolic networks. Issue 1 (December 2016) Authors: Andrade, Ricardo; Wannagat, Martin; Klein, Cecilia; Acuña, Vicente; Marchetti-Spaccamela, Alberto; Milreu, Paulo; Stougie, Leen; Sagot, Marie-France Journal: Algorithms for molecular biology Issue: Volume 11:Issue 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Fast-SG: an alignment-free algorithm for hybrid assembly. Issue 5 (5th May 2018) Authors: Di Genova, Alex; Ruz, Gonzalo A; Sagot, Marie-France; Maass, Alejandro Journal: GigaScience Issue: Volume 7:Issue 5(2018) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. How Long Does Wolbachia Remain on Board?. (13th February 2017) Authors: Bailly-Bechet, Marc; Martins-Simões, Patricia; Szöllősi, Gergely J.; Mialdea, Gladys; Sagot, Marie-France; Charlat, Sylvain Journal: Molecular biology and evolution Issue: Volume 34:Number 5(2017:May) Page Start: 1183 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Insights on the virulence of swine respiratory tract mycoplasmas through genome-scale metabolic modeling. (December 2016) Authors: Ferrarini, Mariana; Siqueira, Franciele; Mucha, Scheila; Palama, Tony; Jobard, Élodie; Elena-Herrmann, Bénédicte; R. Vasconcelos, Ana; Tardy, Florence; Schrank, Irene; Zaha, Arnaldo; Sagot, Marie-France Journal: BMC genomics Issue: Volume 17:Number 1(2016) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗