1. Bioinformatics tools developed to support BioCompute Objects. (30th March 2021) Authors: Patel, Janisha A; Dean, Dennis A; King, Charles Hadley; Xiao, Nan; Koc, Soner; Minina, Ekaterina; Golikov, Anton; Brooks, Phillip; Kahsay, Robel; Navelkar, Rahi; Ray, Manisha; Roberson, Dave; Armstrong, Chris; Mazumder, Raja; Keeney, Jonathon Journal: Database Issue: Volume 2021(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. BioMuta and BioXpress: mutation and expression knowledgebases for cancer biomarker discovery. Issue Volume 46:Issue D1(2018) (9th October 2017) Authors: Dingerdissen, Hayley M; Torcivia-Rodriguez, John; Hu, Yu; Chang, Ting-Chia; Mazumder, Raja; Kahsay, Robel Journal: Nucleic acids research Issue: Volume 46:Issue D1(2018) Page Start: D1128 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Communicating regulatory high-throughput sequencing data using BioCompute Objects. Issue 4 (April 2022) Authors: King, Charles Hadley S.; Keeney, Jonathon; Guimera, Nuria; Das, Souvik; Weber, Michiel; Fochtman, Brian; Walderhaug, Mark O.; Talwar, Sneh; Patel, Janisha A.; Mazumder, Raja; Donaldson, Eric F. Journal: Drug discovery today Issue: Volume 27:Issue 4(2022) Page Start: 1108 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. COVID-19 biomarkers and their overlap with comorbidities in a disease biomarker data model. Issue 6 (20th May 2021) Authors: Gogate, Nikhita; Lyman, Daniel; Bell, Amanda; Cauley, Edmund; Crandall, Keith A; Joseph, Ashia; Kahsay, Robel; Natale, Darren A; Schriml, Lynn M; Sen, Sabyasach; Mazumder, Raja Journal: Briefings in bioinformatics Issue: Volume 22:Issue 6(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. DEXTER: Disease-Expression Relation Extraction from Text. (30th May 2018) Authors: Gupta, Samir; Dingerdissen, Hayley; Ross, Karen E; Hu, Yu; Wu, Cathy H; Mazumder, Raja; Vijay-Shanker, K Journal: Database Issue: Volume 2018(2018) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Enhancing the interoperability of glycan data flow between ChEBI, PubChem and GlyGen. (26th July 2021) Authors: Navelkar, Rahi; Owen, Gareth; Mutherkrishnan, Venkatesh; Thiessen, Paul; Cheng, Tiejun; Bolton, Evan; Edwards, Nathan; Tiemeyer, Michael; Campbell, Matthew P; Martin, Maria; Vora, Jeet; Kahsay, Robel; Mazumder, Raja Journal: Glycobiology Issue: Volume 31:Number 11(2021) Page Start: 1510 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. GlyGen: Computational and Informatics Resources for Glycoscience. (16th October 2019) Authors: York, William S; Mazumder, Raja; Ranzinger, Rene; Edwards, Nathan; Kahsay, Robel; Aoki-Kinoshita, Kiyoko F; Campbell, Matthew P; Cummings, Richard D; Feizi, Ten; Martin, Maria; Natale, Darren A; Packer, Nicolle H; Woods, Robert J; Agarwal, Gaurav; Arpinar, Sena; Bhat, Sanath; Blake, Judith; Castr... Journal: Glycobiology Issue: Volume 30:Number 2(2020) Page Start: 72 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Human germline and pan-cancer variomes and their distinct functional profiles. Issue 18 (7th October 2014) Authors: Pan, Yang; Karagiannis, Konstantinos; Zhang, Haichen; Dingerdissen, Hayley; Shamsaddini, Amirhossein; Wan, Quan; Simonyan, Vahan; Mazumder, Raja Journal: Nucleic acids research Issue: Volume 42:Issue 18(2014) Page Start: 11570 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Identification of key differentially expressed MicroRNAs in cancer patients through pan-cancer analysis. (1st December 2018) Authors: Hu, Yu; Dingerdissen, Hayley; Gupta, Samir; Kahsay, Robel; Shanker, Vijay; Wan, Quan; Yan, Cheng; Mazumder, Raja Journal: Computers in biology and medicine Issue: Volume 103(2018) Page Start: 183 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Modeling and integration of N-glycan biomarkers in a comprehensive biomarker data model. (4th August 2022) Authors: Lyman, Daniel F; Bell, Amanda; Black, Alyson; Dingerdissen, Hayley; Cauley, Edmund; Gogate, Nikhita; Liu, David; Joseph, Ashia; Kahsay, Robel; Crichton, Daniel J; Mehta, Anand; Mazumder, Raja Journal: Glycobiology Issue: Volume 32:Number 10(2022) Page Start: 855 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗