1. An expanded phenotype centric benchmark of variant prioritisation tools. Issue 5 (9th March 2022) Authors: Anderson, Denise; Lassmann, Timo Journal: Human mutation Issue: Volume 43:Issue 5(2022) Page Start: 539 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Common and Rare Genetic Variants That Could Contribute to Severe Otitis Media in an Australian Aboriginal Population. (9th March 2021) Authors: Jamieson, Sarra E; Fakiola, Michaela; Tang, Dave; Scaman, Elizabeth; Syn, Genevieve; Francis, Richard W; Coates, Harvey L; Anderson, Denise; Lassmann, Timo; Cordell, Heather J; Blackwell, Jenefer M Journal: Clinical infectious diseases Issue: Volume 73:Number 10(2021) Page Start: 1860 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Conserved temporal ordering of promoter activation implicates common mechanisms governing the immediate early response across cell types and stimuli. Issue 8 (8th August 2018) Authors: Vacca, Annalaura; Itoh, Masayoshi; Kawaji, Hideya; Arner, Erik; Lassmann, Timo; Daub, Carsten O.; Carninci, Piero; Forrest, Alistair R. R.; Hayashizaki, Yoshihide; Aitken, Stuart; Semple, Colin A. Journal: Open biology Issue: Volume 8:Issue 8(2018) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Integration of genetics and miRNA–target gene network identified disease biology implicated in tissue specificity. Issue 22 (8th November 2018) Authors: Sakaue, Saori; Hirata, Jun; Maeda, Yuichi; Kawakami, Eiryo; Nii, Takuro; Kishikawa, Toshihiro; Ishigaki, Kazuyoshi; Terao, Chikashi; Suzuki, Ken; Akiyama, Masato; Suita, Naomasa; Masuda, Tatsuo; Ogawa, Kotaro; Yamamoto, Kenichi; Saeki, Yukihiko; Matsushita, Masato; Yoshimura, Maiko; Matsuoka, Hid... Journal: Nucleic acids research Issue: Volume 46:Issue 22(2018) Page Start: 11898 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase. (26th December 2016) Authors: Ienasescu, Hans; Li, Kang; Andersson, Robin; Vitezic, Morana; Rennie, Sarah; Chen, Yun; Vitting-Seerup, Kristoffer; Lagoni, Emil; Boyd, Mette; Bornholdt, Jette; de Hoon, Michiel J. L.; Kawaji, Hideya; Lassmann, Timo; Hayashizaki, Yoshihide; Forrest, Alistair R. R.; Carninci, Piero; Sandelin, Albin Journal: Database Issue: Volume 2016(2016) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics. Issue 14 (27th June 2015) Authors: Roy, Sugata; Schmeier, Sebastian; Arner, Erik; Alam, Tanvir; Parihar, Suraj P.; Ozturk, Mumin; Tamgue, Ousman; Kawaji, Hideya; de Hoon, Michiel J. L.; Itoh, Masayoshi; Lassmann, Timo; Carninci, Piero; Hayashizaki, Yoshihide; Forrest, Alistair R. R.; Bajic, Vladimir B.; Guler, ... Journal: Nucleic acids research Issue: Volume 43:Issue 14(2015) Page Start: 6969 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Specific Mesothelial Signature Marks the Heterogeneity of Mesenchymal Stem Cells From High-Grade Serous Ovarian Cancer. (14th October 2014) Authors: Verardo, Roberto; Piazza, Silvano; Klaric, Enio; Ciani, Yari; Bussadori, Giulio; Marzinotto, Stefania; Mariuzzi, Laura; Cesselli, Daniela; Beltrami, Antonio P.; Mano, Miguel; Itoh, Masayoshi; Kawaji, Hideya; Lassmann, Timo; Carninci, Piero; Hayashizaki, Yoshihide; Forrest, Alistair R. R.; Beltram... Journal: Stem cells Issue: Volume 32:Number 11(2014:Nov.) Page Start: 2998 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Specific Mesothelial Signature Marks the Heterogeneity of Mesenchymal Stem Cells From High‐Grade Serous Ovarian Cancer. (November 2014) Authors: Verardo, Roberto; Piazza, Silvano; Klaric, Enio; Ciani, Yari; Bussadori, Giulio; Marzinotto, Stefania; Mariuzzi, Laura; Cesselli, Daniela; Beltrami, Antonio P.; Mano, Miguel; Itoh, Masayoshi; Kawaji, Hideya; Lassmann, Timo; Carninci, Piero; Hayashizaki, Yoshihide; Forrest, Alistair R. R.; The Fan... Journal: Stem cells Issue: Volume 32:Number 11(2014:Nov.) Page Start: 2998 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. TagDust2: a generic method to extract reads from sequencing data. Issue 1 (December 2015) Authors: Lassmann, Timo Journal: BMC bioinformatics Issue: Volume 16:Issue 1(2015) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Technical Advance: Transcription factor, promoter, and enhancer utilization in human myeloid cells. Issue 5 (25th February 2015) Authors: Joshi, Anagha; Pooley, Christopher; Freeman, Tom C.; Lennartsson, Andreas; Babina, Magda; Schmidl, Christian; Geijtenbeek, Teunis; Michoel, Tom; Severin, Jessica; Itoh, Masayoshi; Lassmann, Timo; Kawaji, Hideya; Hayashizaki, Yoshihide; Carninci, Piero; Forrest, Alistair R. R.; Rehli, Michael; Hum... Journal: Journal of leukocyte biology Issue: Volume 97:Issue 5(2015) Page Start: 985 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗