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Author/Creator Griffith, Malachi

1. A deep learning approach to automate refinement of somatic variant calling from cancer sequencing data. (December 2018)

Authors:
Ainscough, Benjamin; Barnell, Erica; Ronning, Peter; Campbell, Katie; Wagner, Alex; Fehniger, Todd; Dunn, Gavin; Uppaluri, Ravindra; Govindan, Ramaswamy; Rohan, Thomas; Griffith, Malachi; Mardis, Elaine; Swamidass, S.; Griffith, Obi
Journal:
Nature genetics
Issue:
Volume 50:Number 12(2018)
Page Start:
1735
Record Type:
Journal Article
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Available online (eLD content is only available in our Reading Rooms) ↗

3. Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community‐driven standards. Issue 11 (11th October 2018)

Authors:
Danos, Arpad M.; Ritter, Deborah I.; Wagner, Alex H.; Krysiak, Kilannin; Sonkin, Dmitriy; Micheel, Christine; McCoy, Matthew; Rao, Shruti; Raca, Gordana; Boca, Simina M.; Roy, Angshumoy; Barnell, Erica K.; McMichael, Joshua F.; Kiwala, Susanna; Coffman, Adam C.; Kujan, Lynzey; Kulkarni, Shashikan...
Other Names:
Rehm Heidi L. guestEditor.; Berg Jonathan S. guestEditor.; Plon Sharon E. guestEditor.
Journal:
Human mutation
Issue:
Volume 39:Issue 11(2018)
Page Start:
1721
Record Type:
Journal Article
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4. Author Correction: The prognostic effects of somatic mutations in ER-positive breast cancer. Issue 1 (December 2018)

Authors:
Griffith, Obi; Spies, Nicholas; Anurag, Meenakshi; Griffith, Malachi; Luo, Jingqin; Tu, Dongsheng; Yeo, Belinda; Kunisaki, Jason; Miller, Christopher; Krysiak, Kilannin; Hundal, Jasreet; Ainscough, Benjamin; Skidmore, Zachary; Campbell, Katie; Kumar, Runjun; Fronick, Catrina; Cook, Lisa; Snider, ...
Journal:
Nature communications
Issue:
Volume 9:Issue 1(2018)
Page Start:
1
Record Type:
Journal Article
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5. CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase. Issue Volume 51:Issue D1(2023) (14th November 2022)

Authors:
Krysiak, Kilannin; Danos, Arpad M; Saliba, Jason; McMichael, Joshua F; Coffman, Adam C; Kiwala, Susanna; Barnell, Erica K; Sheta, Lana; Grisdale, Cameron J; Kujan, Lynzey; Pema, Shahil; Lever, Jake; Ridd, Sarah; Spies, Nicholas C; Andric, Veronica; Chiorean, Andreea;...
Journal:
Nucleic acids research
Issue:
Volume 51:Issue D1(2023)
Page Start:
D1230
Record Type:
Journal Article
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6. DGIdb 2.0: mining clinically relevant drug–gene interactions. Issue Volume 44:Issue D1(2016) (3rd November 2015)

Authors:
Wagner, Alex H.; Coffman, Adam C.; Ainscough, Benjamin J.; Spies, Nicholas C.; Skidmore, Zachary L.; Campbell, Katie M.; Krysiak, Kilannin; Pan, Deng; McMichael, Joshua F.; Eldred, James M.; Walker, Jason R.; Wilson, Richard K.; Mardis, Elaine R.; Griffith, Malachi; Griffith, Obi L.
Journal:
Nucleic acids research
Issue:
Volume 44:Issue D1(2016)
Page Start:
D1036
Record Type:
Journal Article
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7. DGIdb 3.0: a redesign and expansion of the drug–gene interaction database. Issue Volume 46:Issue D1(2018) (16th November 2017)

Authors:
Cotto, Kelsy C; Wagner, Alex H; Feng, Yang-Yang; Kiwala, Susanna; Coffman, Adam C; Spies, Gregory; Wollam, Alex; Spies, Nicholas C; Griffith, Obi L; Griffith, Malachi
Journal:
Nucleic acids research
Issue:
Volume 46:Issue D1(2018)
Page Start:
D1068
Record Type:
Journal Article
View Content:
Available online (eLD content is only available in our Reading Rooms) ↗