1. Assessment of Coronavirus Disease 2019 Intervention Strategies in the Nordic Countries Using Genomic Epidemiology. (3rd January 2022) Authors: Duchene, Sebastian; Featherstone, Leo; Freiesleben de Blasio, Birgitte; Holmes, Edward C; Bohlin, Jon; Pettersson, John H O Journal: Open forum infectious diseases Issue: Volume 9:Number 3(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Bayesian Evaluation of Temporal Signal in Measurably Evolving Populations. (6th July 2020) Authors: Duchene, Sebastian; Lemey, Philippe; Stadler, Tanja; Ho, Simon Y W; Duchene, David A; Dhanasekaran, Vijaykrishna; Baele, Guy Editors: Crandall, Keith Journal: Molecular biology and evolution Issue: Volume 37:Number 11(2020) Page Start: 3363 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Development of Phylodynamic Methods for Bacterial Pathogens. Issue 9 (September 2021) Authors: Ingle, Danielle J.; Howden, Benjamin P.; Duchene, Sebastian Journal: Trends in microbiology Issue: Volume 29:Issue 9(2021) Page Start: 788 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Epidemiological inference from pathogen genomes: A review of phylodynamic models and applications. Issue 1 (2nd June 2022) Authors: Featherstone, Leo A; Zhang, Joshua M; Vaughan, Timothy G; Duchene, Sebastian Journal: Virus evolution Issue: Volume 8:Issue 1(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. Evolutionary rate of SARS-CoV-2 increases during zoonotic infection of farmed mink. Issue 1 (10th January 2023) Authors: Porter, Ashleigh F; Purcell, Damian F J; Howden, Benjamin P; Duchene, Sebastian Journal: Virus evolution Issue: Volume 9:Issue 1(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Exploring the evolution and epidemiology of European CC1-MRSA-IV: tracking a multidrug-resistant community-associated meticillin-resistant Staphylococcus aureus clone. Issue 7 (5th July 2021) Authors: Earls, Megan R.; Steinig, Eike J.; Monecke, Stefan; Samaniego Castruita, José A.; Simbeck, Alexandra; Schneider-Brachert, Wulf; Vremerǎ, Teodora; Dorneanu, Olivia S.; Loncaric, Igor; Bes, Michèle; Lacoma, Alicia; Prat Aymerich, Cristina; Wernery, Ulrich; Armengol-Porta, Marc; Blomfeldt, Anita; Du... Journal: Microbial genomics Issue: Volume 7:Issue 7(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Genomic characterisation reveals a dominant lineage of SARS-CoV-2 in Papua New Guinea. Issue 1 (7th April 2022) Authors: Palou, Theresa; Wilmot, Mathilda; Duchene, Sebastian; Porter, Ashleigh; Kemoi, Janlyn; Suarkia, Dagwin; Andersson, Patiyan; Watt, Anne; Sherry, Norelle; Seemann, Torsten; Sait, Michelle; Turharus, Charlie; Nguyen, Son; Schlebusch, Sanmarié; Thompson, Craig; McMahon, Jamie; Vaccher, Stefanie; Lin,... Journal: Virus evolution Issue: Volume 8:Issue 1(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Genomics-informed responses in the elimination of COVID-19 in Victoria, Australia: an observational, genomic epidemiological study. (August 2021) Authors: Lane, Courtney R; Sherry, Norelle L; Porter, Ashleigh F; Duchene, Sebastian; Horan, Kristy; Andersson, Patiyan; Wilmot, Mathilda; Turner, Annabelle; Dougall, Sally; Johnson, Sandra A; Sait, Michelle; Gonçalves da Silva, Anders; Ballard, Susan A; Hoang, Tuyet; Stinear, Timothy P; Caly, Leon; Sintc... Journal: Lancet Issue: Volume 6:Number 8(2021) Page Start: e547 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Phylodynamic Model Adequacy Using Posterior Predictive Simulations. (25th June 2018) Authors: Duchene, Sebastian; Bouckaert, Remco; Duchene, David A; Stadler, Tanja; Drummond, Alexei J Editors: Townsend, Jeffry Journal: Systematic biology Issue: Volume 68:Number 2(2019) Page Start: 358 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Real-Time and Remote MCMC Trace Inspection with Beastiary. (12th May 2022) Authors: Wirth, Wytamma; Duchene, Sebastian Editors: Falush, Daniel Journal: Molecular biology and evolution Issue: Volume 39:Number 5(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗