1. A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence. Issue 1 (17th October 2020) Authors: Venturini, Elisa; Svensson, Sarah L; Maaß, Sandra; Gelhausen, Rick; Eggenhofer, Florian; Li, Lei; Cain, Amy K; Parkhill, Julian; Becher, Dörte; Backofen, Rolf; Barquist, Lars; Sharma, Cynthia M; Westermann, Alexander J; Vogel, Jörg Journal: MicroLife Issue: Volume 1:Issue 1(2020) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. A single-cell RNA-sequencing training and analysis suite using the Galaxy framework. Issue 10 (20th October 2020) Authors: Tekman, Mehmet; Batut, Bérénice; Ostrovsky, Alexander; Antoniewski, Christophe; Clements, Dave; Ramirez, Fidel; Etherington, Graham J; Hotz, Hans-Rudolf; Scholtalbers, Jelle; Manning, Jonathan R; Bellenger, Lea; Doyle, Maria A; Heydarian, Mohammad; Huang, Ni; Soranzo, Nicola; Moreno, Pablo; Mautn... Journal: GigaScience Issue: Volume 9:Issue 10(2020) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. An accessible infrastructure for artificial intelligence using a Docker-based JupyterLab in Galaxy. (26th April 2023) Authors: Kumar, Anup; Cuccuru, Gianmauro; Grüning, Björn; Backofen, Rolf Journal: GigaScience Issue: Volume 12(2023) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. AntaRNA – Multi-objective inverse folding of pseudoknot RNA using ant-colony optimization. Issue 1 (December 2015) Authors: Kleinkauf, Robert; Houwaart, Torsten; Backofen, Rolf; Mann, Martin Journal: BMC bioinformatics Issue: Volume 16:Issue 1(2015) Page Start: 1 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. ChiRA: an integrated framework for chimeric read analysis from RNA-RNA interactome and RNA structurome data. Issue 2 (29th January 2021) Authors: Videm, Pavankumar; Kumar, Anup; Zharkov, Oleg; Grüning, Björn Andreas; Backofen, Rolf Journal: GigaScience Issue: Volume 10:Issue 2(2021) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Combinatorial ensemble miRNA target prediction of co-regulation networks with non-prediction data. Issue 15 (13th July 2017) Authors: Davis, Jason A.; Saunders, Sita J.; Mann, Martin; Backofen, Rolf Journal: Nucleic acids research Issue: Volume 45:Issue 15(2017) Page Start: 8745 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Comparative analysis of the antioxidant properties of Icelandic and Hawaiian lichens. (22nd April 2015) Authors: Hagiwara, Kehau; Wright, Patrick R.; Tabandera, Nicole K.; Kelman, Dovi; Backofen, Rolf; Ómarsdóttir, Sesselja; Wright, Anthony D. Journal: Environmental microbiology Issue: Volume 18:Number 8(2016:Aug.) Page Start: 2319 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Comprehensive search for accessory proteins encoded with archaeal and bacterial type III CRISPR-cas gene cassettes reveals 39 new cas gene families. Issue 4 (3rd April 2019) Authors: Shah, Shiraz A.; Alkhnbashi, Omer S.; Behler, Juliane; Han, Wenyuan; She, Qunxin; Hess, Wolfgang R.; Garrett, Roger A.; Backofen, Rolf Journal: RNA biology Issue: Volume 16:Issue 4(2019) Page Start: 530 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. CRISPR-Cas systems in multicellular cyanobacteria. Issue 4 (3rd April 2019) Authors: Hou, Shengwei; Brenes-Álvarez, Manuel; Reimann, Viktoria; Alkhnbashi, Omer S.; Backofen, Rolf; Muro-Pastor, Alicia M.; Hess, Wolfgang R. Journal: RNA biology Issue: Volume 16:Issue 4(2019) Page Start: 518 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. CRISPRcasIdentifier: Machine learning for accurate identification and classification of CRISPR-Cas systems. Issue 6 (17th June 2020) Authors: Padilha, Victor A; Alkhnbashi, Omer S; Shah, Shiraz A; de Carvalho, André C P L F; Backofen, Rolf Journal: GigaScience Issue: Volume 9:Issue 6(2020) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗