1. Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs. Issue 4 (1st June 2022) Authors: Sen, Neeladri; Anishchenko, Ivan; Bordin, Nicola; Sillitoe, Ian; Velankar, Sameer; Baker, David; Orengo, Christine Journal: Briefings in bioinformatics Issue: Volume 23:Issue 4(2022) Page Start: Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
2. Deep learning enables the atomic structure determination of the Fanconi Anemia core complex from cryoEM. (2020) Authors: Farrell, Daniel P.; Anishchenko, Ivan; Shakeel, Shabih; Lauko, Anna; Passmore, Lori A.; Baker, David; DiMaio, Frank Journal: IUCrJ Issue: Volume 7:Part 5(2020) Page Start: 881 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
3. Dockground: A comprehensive data resource for modeling of protein complexes. (10th October 2017) Authors: Kundrotas, Petras J.; Anishchenko, Ivan; Dauzhenka, Taras; Kotthoff, Ian; Mnevets, Daniil; Copeland, Matthew M.; Vakser, Ilya A. Journal: Protein science Issue: Volume 27:Number 1(2018) Page Start: 172 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
4. Gene ontology improves template selection in comparative protein docking. Issue 3 (27th December 2018) Authors: Hadarovich, Anna; Anishchenko, Ivan; Tuzikov, Alexander V.; Kundrotas, Petras J.; Vakser, Ilya A. Journal: Proteins Issue: Volume 87:Issue 3(2019) Page Start: 245 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
5. High‐accuracy refinement using Rosetta in CASP13. Issue 12 (5th August 2019) Authors: Park, Hahnbeom; Lee, Gyu Rie; Kim, David E.; Anishchenko, Ivan; Cong, Qian; Baker, David Journal: Proteins Issue: Volume 87:Issue 12(2019) Page Start: 1276 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
6. Modeling CAPRI targets 110‐120 by template‐based and free docking using contact potential and combined scoring function. (28th September 2017) Authors: Kundrotas, Petras J.; Anishchenko, Ivan; Badal, Varsha D.; Das, Madhurima; Dauzhenka, Taras; Vakser, Ilya A. Journal: Proteins Issue: Volume 86(2017)Supplement 1 Page Start: 302 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
7. Modeling complexes of modeled proteins. Issue 3 (24th October 2016) Authors: Anishchenko, Ivan; Kundrotas, Petras J.; Vakser, Ilya A. Journal: Proteins Issue: Volume 85:Issue 3(2017) Page Start: 470 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
8. Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment. (1st June 2016) Authors: Lensink, Marc F.; Velankar, Sameer; Kryshtafovych, Andriy; Huang, Shen‐You; Schneidman‐Duhovny, Dina; Sali, Andrej; Segura, Joan; Fernandez‐Fuentes, Narcis; Viswanath, Shruthi; Elber, Ron; Grudinin, Sergei; Popov, Petr; Neveu, Emilie; Lee, Hasup; Baek, Minkyung; Park, Sangwoo; Heo, Lim; Rie Lee, ... Journal: Proteins Issue: Volume 84(2016)Supplement 1 Page Start: 323 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
9. Protein models docking benchmark 2. Issue 5 (25th March 2015) Authors: Anishchenko, Ivan; Kundrotas, Petras J.; Tuzikov, Alexander V.; Vakser, Ilya A. Journal: Proteins Issue: Volume 83:Issue 5(2015) Page Start: 891 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗
10. Protein models: The Grand Challenge of protein docking. Issue 2 (17th October 2013) Authors: Anishchenko, Ivan; Kundrotas, Petras J.; Tuzikov, Alexander V.; Vakser, Ilya A. Journal: Proteins Issue: Volume 82:Issue 2(2014) Page Start: 278 Record Type: Journal Article View Content: Available online (eLD content is only available in our Reading Rooms) ↗