A novel high‐prevalence antigen in the Lutheran system, LUGA (LU24), and an updated, full‐length 3D BCAM model. Issue 4 (4th February 2023)

• Record Type: Journal Article
• Authors: Floch, Aline; Lomas‐Francis, Christine; Vege, Sunitha; Brennan, Steven; Shakarian, Gayane; de Brevern, Alexandre G.; Westhoff, Connie M.
• Is Part Of: Transfusion. Volume 63:Issue 4(2023)
• Page Start: 798
• Page End: 807
• Publication Date: 2023-02-04
• Subjects: antigen -- BCAM -- blood group -- genomics -- LU -- Lutheran -- molecular modeling -- red blood cell; Hematology -- Periodicals; Blood -- Transfusion -- Periodicals; Blood Group Antigens -- Periodicals; Blood Preservation -- Periodicals; Blood Transfusion -- Periodicals; 615
• DOI: 10.1111/trf.17262
• Languages: English
• ISSNs: 0041-1132

Abstract

Abstract: Background: The basal cell adhesion molecule (BCAM) carries the antigens of the Lutheran (LU, ISBT005) system. We report a novel Lutheran antigen and propose an updated, full‐length 3D model of BCAM. Study Design and Methods: Red blood cell testing, antibody identification, and BCAM genomic DNA sequencing were done by standard methods. Multi‐template homology modeling of BCAM used structural templates selected for coverage, highest sequence identity, and protein domain family. All variants causing the loss or gain of a Lutheran antigen were analyzed for residue accessibility and intraprotein interactions. Results: An antibody to a high‐prevalence antigen in the plasma of a pregnant woman was determined to be directed at a novel Lutheran antigen. Sequencing of BCAM found three homozygous changes: c.212G > A (p.Arg71His) and two silent, c.711C > T and c.714C > T. The model was built from the first two immunoglobulin crystallized domains of BCAM (D1, D2), three other templates (for D3, D4 and D5 with a higher sequence identity with the target than those used for the model proposed by Burton and Brady in 2008, and for the transmembrane region) and RaptorX (for the intracellular domain). All residues associated with a Lutheran antigen were found to be exposed in wild‐type or variant proteins, except p.447 associated with loss of Lu13 expression. Conclusion: The c.212G > A change results in the loss of LUGA (LU24) antigen. Whole genome sequencing continues to reveal polymorphisms with uncertain immunogenicity. This model and demonstration that nearly all residues associated with the expression of a Lutheran antigen are exposed will help evaluate the significance of new polymorphisms.