MRI‐based radiomics signature for tumor grading of rectal carcinoma using random forest model. Issue 11 (9th May 2019)
- Record Type:
- Journal Article
- Title:
- MRI‐based radiomics signature for tumor grading of rectal carcinoma using random forest model. Issue 11 (9th May 2019)
- Main Title:
- MRI‐based radiomics signature for tumor grading of rectal carcinoma using random forest model
- Authors:
- He, Bo
Ji, Tao
Zhang, Hong
Zhu, Yun
Shu, Ruo
Zhao, Wei
Wang, Kunhua - Abstract:
- Abstract: The present study aimed to construct prospective models for tumor grading of rectal carcinoma by using magnetic resonance (MR)‐based radiomics features. A set of 118 patients with rectal carcinoma was analyzed. After imbalance‐adjustments of the data using Synthetic Minority Oversampling Technique (SMOTE), the final data set was randomized into the training set and validation set at the ratio of 3:1. The radiomics features were captured from manually segmented lesion of magnetic resonance imaging (MRI). The most related radiomics features were selected using the random forest model by calculating the Gini importance of initial extracted characteristics. A random forest classifier model was constructed using the top important features. The classifier model performance was evaluated via receive operator characteristic curve and area under the curve (AUC). A total of 1, 131 radiomics features were extracted from segmented lesion. The top 50 most important features were selected to construct a random forest classifier model. The AUC values of grade 1, 2, 3, and 4 for training set were 0.918, 0.822, 0.775, and 1.000, respectively, and the corresponding AUC values for testing set were 0.717, 0.683, 0.690, and 0.827 separately. The developed feature selection method and machine learning‐based prediction models using radiomics features of MRI show a relatively acceptable performance in tumor grading of rectal carcinoma and could distinguish the tumor subjects from theAbstract: The present study aimed to construct prospective models for tumor grading of rectal carcinoma by using magnetic resonance (MR)‐based radiomics features. A set of 118 patients with rectal carcinoma was analyzed. After imbalance‐adjustments of the data using Synthetic Minority Oversampling Technique (SMOTE), the final data set was randomized into the training set and validation set at the ratio of 3:1. The radiomics features were captured from manually segmented lesion of magnetic resonance imaging (MRI). The most related radiomics features were selected using the random forest model by calculating the Gini importance of initial extracted characteristics. A random forest classifier model was constructed using the top important features. The classifier model performance was evaluated via receive operator characteristic curve and area under the curve (AUC). A total of 1, 131 radiomics features were extracted from segmented lesion. The top 50 most important features were selected to construct a random forest classifier model. The AUC values of grade 1, 2, 3, and 4 for training set were 0.918, 0.822, 0.775, and 1.000, respectively, and the corresponding AUC values for testing set were 0.717, 0.683, 0.690, and 0.827 separately. The developed feature selection method and machine learning‐based prediction models using radiomics features of MRI show a relatively acceptable performance in tumor grading of rectal carcinoma and could distinguish the tumor subjects from the healthy ones, which is important for the prognosis of cancer patients. Abstract : We proposed an automatic tumor grading model accommodating the most important radiomics features with the method of random forest, and it holds the promise to be applied to help surgeon make an appropriate preoperative treatment plan and the evaluation of prognosis. … (more)
- Is Part Of:
- Journal of cellular physiology. Volume 234:Issue 11(2019:Nov.)
- Journal:
- Journal of cellular physiology
- Issue:
- Volume 234:Issue 11(2019:Nov.)
- Issue Display:
- Volume 234, Issue 11 (2019)
- Year:
- 2019
- Volume:
- 234
- Issue:
- 11
- Issue Sort Value:
- 2019-0234-0011-0000
- Page Start:
- 20501
- Page End:
- 20509
- Publication Date:
- 2019-05-09
- Subjects:
- MRI -- radiomics feature -- random forest -- rectal carcinoma -- tumor grading
Physiology -- Periodicals
Cell physiology -- Periodicals
571.6 - Journal URLs:
- http://onlinelibrary.wiley.com/journal/10.1002/(ISSN)1097-4652 ↗
http://onlinelibrary.wiley.com/ ↗ - DOI:
- 10.1002/jcp.28650 ↗
- Languages:
- English
- ISSNs:
- 0021-9541
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 4955.020000
British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 26265.xml