EchoEFNet: Multi-task deep learning network for automatic calculation of left ventricular ejection fraction in 2D echocardiography. (April 2023)
- Record Type:
- Journal Article
- Title:
- EchoEFNet: Multi-task deep learning network for automatic calculation of left ventricular ejection fraction in 2D echocardiography. (April 2023)
- Main Title:
- EchoEFNet: Multi-task deep learning network for automatic calculation of left ventricular ejection fraction in 2D echocardiography
- Authors:
- Li, Honghe
Wang, Yonghuai
Qu, Mingjun
Cao, Peng
Feng, Chaolu
Yang, Jinzhu - Abstract:
- Abstract: Left ventricular ejection fraction (LVEF) is essential for evaluating left ventricular systolic function. However, its clinical calculation requires the physician to interactively segment the left ventricle and obtain the mitral annulus and apical landmarks. This process is poorly reproducible and error prone. In this study, we propose a multi-task deep learning network EchoEFNet. The network use ResNet50 with dilated convolution as the backbone to extract high-dimensional features while maintaining spatial features. The branching network used our designed multi-scale feature fusion decoder to segment the left ventricle and detect landmarks simultaneously. The LVEF was then calculated automatically and accurately using the biplane Simpson's method. The model was tested for performance on the public dataset CAMUS and private dataset CMUEcho. The experimental results showed that the geometrical metrics and percentage of correct keypoints of EchoEFNet outperformed other deep learning methods. The correlation between the predicted LVEF and true values on the CAMUS and CMUEcho datasets was 0.854 and 0.916, respectively. Highlights: A multi-task learning model is designed for both segmentation and landmark detection tasks. The proposed landmark detection mechanism is able to reduce the burden of human annotate. The indices are calculated in a manner consistent with the clinical workflow. The model is validated on two datasets. The results are highly correlated with theAbstract: Left ventricular ejection fraction (LVEF) is essential for evaluating left ventricular systolic function. However, its clinical calculation requires the physician to interactively segment the left ventricle and obtain the mitral annulus and apical landmarks. This process is poorly reproducible and error prone. In this study, we propose a multi-task deep learning network EchoEFNet. The network use ResNet50 with dilated convolution as the backbone to extract high-dimensional features while maintaining spatial features. The branching network used our designed multi-scale feature fusion decoder to segment the left ventricle and detect landmarks simultaneously. The LVEF was then calculated automatically and accurately using the biplane Simpson's method. The model was tested for performance on the public dataset CAMUS and private dataset CMUEcho. The experimental results showed that the geometrical metrics and percentage of correct keypoints of EchoEFNet outperformed other deep learning methods. The correlation between the predicted LVEF and true values on the CAMUS and CMUEcho datasets was 0.854 and 0.916, respectively. Highlights: A multi-task learning model is designed for both segmentation and landmark detection tasks. The proposed landmark detection mechanism is able to reduce the burden of human annotate. The indices are calculated in a manner consistent with the clinical workflow. The model is validated on two datasets. The results are highly correlated with the true value. … (more)
- Is Part Of:
- Computers in biology and medicine. Volume 156(2023)
- Journal:
- Computers in biology and medicine
- Issue:
- Volume 156(2023)
- Issue Display:
- Volume 156, Issue 2023 (2023)
- Year:
- 2023
- Volume:
- 156
- Issue:
- 2023
- Issue Sort Value:
- 2023-0156-2023-0000
- Page Start:
- Page End:
- Publication Date:
- 2023-04
- Subjects:
- Ejection fraction -- Echocardiogram -- Multitasking -- Deep learning
Medicine -- Data processing -- Periodicals
Biology -- Data processing -- Periodicals
610.285 - Journal URLs:
- http://www.sciencedirect.com/science/journal/00104825/ ↗
http://www.elsevier.com/journals ↗ - DOI:
- 10.1016/j.compbiomed.2023.106705 ↗
- Languages:
- English
- ISSNs:
- 0010-4825
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 3394.880000
British Library DSC - BLDSS-3PM
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