Community curation in PomBase: enabling fission yeast experts to provide detailed, standardized, sharable annotation from research publications. (30th April 2020)

• Record Type: Journal Article
• Authors: Lock, Antonia; Harris, Midori A; Rutherford, Kim; Hayles, Jacqueline; Wood, Valerie
• Is Part Of: Database. Volume 2020(2020)
• Publication Date: 2020-04-30
• Subjects: Biology -- Databases -- Periodicals; Bioinformatics -- Periodicals; 570.285
• DOI: 10.1093/database/baaa028
• Languages: English
• ISSNs: 1758-0463

Abstract

Abstract: Maximizing the impact and value of scientific research requires efficient knowledge distribution, which increasingly depends on the integration of standardized published data into online databases. To make data integration more comprehensive and efficient for fission yeast research, PomBase has pioneered a community curation effort that engages publication authors directly in FAIR-sharing of data representing detailed biological knowledge from hypothesis-driven experiments. Canto, an intuitive online curation tool that enables biologists to describe their detailed functional data using shared ontologies, forms the core of PomBase's system. With 8 years' experience, and as the author response rate reaches 50%, we review community curation progress and the insights we have gained from the project. We highlight incentives and nudges we deploy to maximize participation, and summarize project outcomes, which include increased knowledge integration and dissemination as well as the unanticipated added value arising from co-curation by publication authors and professional curators.