Discretization of continuous predictor variables in Bayesian networks: An ecological threshold approach. (April 2015)

• Record Type: Journal Article
• Authors: Lucena-Moya, Paloma; Brawata, Renee; Kath, Jarrod; Harrison, Evan; ElSawah, Sondoss; Dyer, Fiona
• Is Part Of: Environmental modelling & software. Volume 66(2015:Apr.)
• Page Start: 36
• Page End: 45
• Publication Date: 2015-04
• Subjects: Bayesian networks -- Thresholds -- Aquatic ecology -- Macroinvertebrates -- Ecological community -- TITAN -- Discretization; Environmental monitoring -- Computer programs -- Periodicals; Ecology -- Computer simulation -- Periodicals; Digital computer simulation -- Periodicals; Computer software -- Periodicals; Environmental Monitoring -- Periodicals; Computer Simulation -- Periodicals; Environnement -- Surveillance -- Logiciels -- Périodiques; Écologie -- Simulation, Méthodes de -- Périodiques; Simulation par ordinateur -- Périodiques; Logiciels -- Périodiques; Computer software; Digital computer simulation; Ecology -- Computer simulation; Environmental monitoring -- Computer programs; Periodicals; Electronic journals; 363.70015118
• DOI: 10.1016/j.envsoft.2014.12.019
• Languages: English
• ISSNs: 1364-8152

Abstract

Abstract: Bayesian networks (BNs) are a popular tool in natural resource management but are limited when dealing with ecological assemblage data and when discretizing continuous variables. We present a method that addresses these challenges using a BN model developed for the Upper Murrumbidgee River Catchment (south-eastern Australia). A selection process was conducted to choose the taxa from the whole macroinvertebrate assemblage that were incorporated in the BN as endpoints. Furthermore, two different approaches to the discretization of continuous predictor variables for the BN were compared. One approach used Threshold Indicator Taxa Analysis (TITAN) which estimates the thresholds based on the biological community. The other approach used was the expert opinion. The TITAN-based discretizations provided comparable predictions to expert opinion-based discretizations but in combining statistical rigor and ecological relevance, offer a novel and objective approach to the discretization. The TITAN-based method may be used together with expert opinion. Highlights: We propose the empirical estimation of thresholds to discretize continuous predictor variables within Bayesian networks. We used a case study to illustrate it. Predefined criteria were used to select five macroinvertebrate taxa that were incorporated in the BN as endpoints. Continuous predictor variables were discretized using Threshold Indicator Taxa Analysis (TITAN). TITAN-based discretizations provided comparable predictions to expert opinion-based discretizations.