Projecting COVID-19 cases and hospital burden in Ohio. (21st March 2023)

• Record Type: Journal Article
• Authors: KhudaBukhsh, Wasiur R.; Bastian, Caleb Deen; Wascher, Matthew; Klaus, Colin; Sahai, Saumya Yashmohini; Weir, Mark H.; Kenah, Eben; Root, Elisabeth; Tien, Joseph H.; Rempała, Grzegorz A.
• Is Part Of: Journal of theoretical biology. Volume 561(2023)
• Publication Date: 2023-03-21
• Subjects: COVID-19 -- Dynamical Survival Analysis -- SIR model -- Prediction; Biology -- Periodicals; Biological Science Disciplines -- Periodicals; Biology -- Periodicals; Biologie -- Périodiques; Theoretische biologie; Biology; Periodicals; 571.05
• DOI: 10.1016/j.jtbi.2022.111404
• Languages: English
• ISSNs: 0022-5193

Abstract

Abstract: As the Coronavirus 2019 disease (COVID-19) started to spread rapidly in the state of Ohio, the Ecology, Epidemiology and Population Health (EEPH) program within the Infectious Diseases Institute (IDI) at The Ohio State University (OSU) took the initiative to offer epidemic modeling and decision analytics support to the Ohio Department of Health (ODH). This paper describes the methodology used by the OSU/IDI response modeling team to predict statewide cases of new infections as well as potential hospital burden in the state. The methodology has two components: (1) A Dynamical Survival Analysis (DSA)-based statistical method to perform parameter inference, statewide prediction and uncertainty quantification. (2) A geographic component that down-projects statewide predicted counts to potential hospital burden across the state. We demonstrate the overall methodology with publicly available data. A Python implementation of the methodology is also made publicly available. This manuscript was submitted as part of a theme issue on "Modelling COVID-19 and Preparedness for Future Pandemics". Highlights: We present Dynamical Survival Analysis (DSA) method to model an epidemic with incomplete data. DSA does not require size of the susceptible population or the overall prevalence of the disease. DSA was applied to COVID-19 in Ohio to support the Ohio Department of Health (ODH) and the Ohio Hospital Association (OHA).