Quantifying the impact of shape uncertainty on predicted arrhythmias. (February 2023)

• Record Type: Journal Article
• Authors: Corrado, Cesare; Roney, Caroline H.; Razeghi, Orod; Lemus, Josè Alonso Solís; Coveney, Sam; Sim, Iain; Williams, Steven E.; O'Neill, Mark D.; Wilkinson, Richard D.; Clayton, Richard H.; Niederer, Steven A.
• Is Part Of: Computers in biology and medicine. Volume 153(2023)
• Publication Date: 2023-02
• Subjects: Uncertainty quantification -- Cardiac models -- Atrial tachycardia -- Medical image processing; Medicine -- Data processing -- Periodicals; Biology -- Data processing -- Periodicals; 610.285
• DOI: 10.1016/j.compbiomed.2022.106528
• Languages: English
• ISSNs: 0010-4825

Abstract

Abstract: Background: Personalised computer models are increasingly used to diagnose cardiac arrhythmias and tailor treatment. Patient-specific models of the left atrium are often derived from pre-procedural imaging of anatomy and fibrosis. These images contain noise that can affect simulation predictions. There are few computationally tractable methods for propagating uncertainties from images to clinical predictions. Method: We describe the left atrium anatomy using our Bayesian shape model that captures anatomical uncertainty in medical images and has been validated on 63 independent clinical images. This algorithm describes the left atrium anatomy using N modes = 15 principal components, capturing 95% of the shape variance and calculated from 70 clinical cardiac magnetic resonance (CMR) images. Latent variables encode shape uncertainty: we evaluate their posterior distribution for each new anatomy. We assume a normally distributed prior. We use the unscented transform to sample from the posterior shape distribution. For each sample, we assign the local material properties of the tissue using the projection of late gadolinium enhancement CMR (LGE-CMR) onto the anatomy to estimate local fibrosis. To test which activation patterns an atrium can sustain, we perform an arrhythmia simulation for each sample. We consider 34 possible outcomes (31 macro-re-entries, functional re-entry, atrial fibrillation, and non-sustained arrhythmia). For each sample, we determine the outcome by comparing pre- and post-ablation activation patterns following a cross-field stimulus. Results: We create patient-specific atrial electrophysiology models of ten patients. We validate the mean and standard deviation maps from the unscented transform with the same statistics obtained with 12, 000 Monte Carlo (ground truth) samples. We found discrepancies < 3 % and < 2 % for the mean and standard deviation for fibrosis burden and activation time, respectively. For each patient case, we then compare the predicted outcome from a model built on the clinical data (deterministic approach) with the probability distribution obtained from the simulated samples. We found that the deterministic approach did not predict the most likely outcome in 80% of the cases. Finally, we estimate the influence of each source of uncertainty independently. Fixing the anatomy to the posterior mean and maintaining uncertainty in fibrosis reduced the prediction of self-terminating arrhythmias from ≃ 14 % to ≃ 7 % . Keeping the fibrosis fixed to the sample mean while retaining uncertainty in shape decreased the prediction of substrate-driven arrhythmias from ≃ 33 % to ≃ 18 % and increased the prediction of macro-re-entries from ≃ 54 % to ≃ 68 % . Conclusions: We presented a novel method for propagating shape uncertainty in atrial models through to uncertainty in numerical simulations. The algorithm takes advantage of the unscented transform to compute the output distribution of the outcomes. We validated the unscented transform as a viable sampling strategy to deal with anatomy uncertainty. We then showed that the prediction computed with a deterministic model does not always coincide with the most likely outcome. Finally, we found that shape uncertainty affects the predictions of macro-re-entries, while fibrosis uncertainty affects the predictions of functional re-entries. Graphical abstract: Highlights: Uncertainty Propagation from Medical Image Processing to Patient-specific Simulations. Arrhythmia's probability distribution from patient-specific model simulations. Simulated Arrhythmias often do not coincide with the most probable outcome. Unscented transform to tackle the curse of dimensionality.