Automatic cervical cancer segmentation in multimodal magnetic resonance imaging using an EfficientNet encoder in UNet++ architecture. Issue 1 (2nd September 2022)
- Record Type:
- Journal Article
- Title:
- Automatic cervical cancer segmentation in multimodal magnetic resonance imaging using an EfficientNet encoder in UNet++ architecture. Issue 1 (2nd September 2022)
- Main Title:
- Automatic cervical cancer segmentation in multimodal magnetic resonance imaging using an EfficientNet encoder in UNet++ architecture
- Authors:
- Jin, Shan
Xu, Hongming
Dong, Yue
Hao, Xinyu
Qin, Fengying
Xu, Qi
Zhu, Yong
Cong, Fengyu - Abstract:
- Abstract: Automatic cervical cancer segmentation in multimodal magnetic resonance imaging (MRI) is essential because tumor location and delineation can support patients' diagnosis and treatment planning. To meet this clinical demand, we present an encoder–decoder deep learning architecture which employs an EfficientNet encoder in the UNet++ architecture (E‐UNet++). EfficientNet helps in effectively encoding multiscale image features. The nested decoders with skip connections aggregate multiscale features from low‐level to high‐level, which helps in detecting fine‐grained details. A cohort of 228 cervical cancer patients with multimodal MRI sequences, including T2‐weighted imaging, diffusion‐weighted imaging, apparent diffusion coefficient imaging, contrast enhancement T1‐weighted imaging, and dynamic contrast‐enhanced imaging (DCE), has been explored. Evaluations are performed by considering either single or multimodal MRI with standard segmentation quantitative metrics: dice similarity coefficient (DSC), intersection over union (IOU), and 95% Hausdorff distance (HD). Our results show that the E‐UNet++ model can achieve DSC values of 0.681–0.786, IOU values of 0.558–0.678, and 95% HD values of 3.779–7.411 pixels in different single sequences. Meanwhile, it provides DSC values of 0.644 and 0.687 on three DCE subsequences and all MRI sequences together. Our designed model is superior to other comparative models, which shows the potential to be used as an artificialAbstract: Automatic cervical cancer segmentation in multimodal magnetic resonance imaging (MRI) is essential because tumor location and delineation can support patients' diagnosis and treatment planning. To meet this clinical demand, we present an encoder–decoder deep learning architecture which employs an EfficientNet encoder in the UNet++ architecture (E‐UNet++). EfficientNet helps in effectively encoding multiscale image features. The nested decoders with skip connections aggregate multiscale features from low‐level to high‐level, which helps in detecting fine‐grained details. A cohort of 228 cervical cancer patients with multimodal MRI sequences, including T2‐weighted imaging, diffusion‐weighted imaging, apparent diffusion coefficient imaging, contrast enhancement T1‐weighted imaging, and dynamic contrast‐enhanced imaging (DCE), has been explored. Evaluations are performed by considering either single or multimodal MRI with standard segmentation quantitative metrics: dice similarity coefficient (DSC), intersection over union (IOU), and 95% Hausdorff distance (HD). Our results show that the E‐UNet++ model can achieve DSC values of 0.681–0.786, IOU values of 0.558–0.678, and 95% HD values of 3.779–7.411 pixels in different single sequences. Meanwhile, it provides DSC values of 0.644 and 0.687 on three DCE subsequences and all MRI sequences together. Our designed model is superior to other comparative models, which shows the potential to be used as an artificial intelligence tool for cervical cancer segmentation in multimodal MRI. … (more)
- Is Part Of:
- International journal of imaging systems and technology. Volume 33:Issue 1(2023)
- Journal:
- International journal of imaging systems and technology
- Issue:
- Volume 33:Issue 1(2023)
- Issue Display:
- Volume 33, Issue 1 (2023)
- Year:
- 2023
- Volume:
- 33
- Issue:
- 1
- Issue Sort Value:
- 2023-0033-0001-0000
- Page Start:
- 362
- Page End:
- 377
- Publication Date:
- 2022-09-02
- Subjects:
- cervical cancer -- deep learning -- magnetic resonance imaging -- tumor segmentation
Imaging systems -- Periodicals
Image processing -- Periodicals
621.367 - Journal URLs:
- http://onlinelibrary.wiley.com/journal/10.1002/(ISSN)1098-1098 ↗
http://onlinelibrary.wiley.com/ ↗ - DOI:
- 10.1002/ima.22799 ↗
- Languages:
- English
- ISSNs:
- 0899-9457
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - 4542.299000
British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 25056.xml