A Gaussian copula approach for dynamic prediction of survival with a longitudinal biomarker. (10th December 2019)

• Record Type: Journal Article
• Authors: Suresh, Krithika; Taylor, Jeremy M G; Tsodikov, Alexander
• Is Part Of: Biostatistics. Volume 22:Number 3(2021)
• Page Start: 504
• Page End: 521
• Publication Date: 2019-12-10
• Subjects: Dynamic prediction -- Gaussian copula -- Joint modeling -- Landmarking -- Longitudinal data -- Survival analysis; Medical statistics -- Periodicals; Biometry -- Periodicals; Health risk assessment -- Periodicals; Medicine -- Research -- Statistical methods -- Periodicals; 610.727
• DOI: 10.1093/biostatistics/kxz049
• Languages: English
• ISSNs: 1465-4644

Abstract

Summary: Dynamic prediction uses patient information collected during follow-up to produce individualized survival predictions at given time points beyond treatment or diagnosis. This allows clinicians to obtain updated predictions of a patient's prognosis that can be used in making personalized treatment decisions. Two commonly used approaches for dynamic prediction are landmarking and joint modeling. Landmarking does not constitute a comprehensive probability model, and joint modeling often requires strong distributional assumptions and computationally intensive methods for estimation. We introduce an alternative approximate approach for dynamic prediction that aims to overcome the limitations of both methods while achieving good predictive performance. We separately specify the marker and failure time distributions conditional on surviving up to a prediction time of interest and use standard variable selection and goodness-of-fit techniques to identify the best-fitting models. Taking advantage of its analytic tractability and easy two-stage estimation, we use a Gaussian copula to link the marginal distributions smoothly at each prediction time with an association function. With simulation studies, we examine the proposed method's performance. We illustrate its use for dynamic prediction in an application to predicting death for heart valve transplant patients using longitudinal left ventricular mass index information.