Genome‐wide identification and expression analysis of NAC family genes in Ginkgo biloba L. (30th November 2022)

• Record Type: Journal Article
• Authors: Li, Y.; Han, H.; Fu, M.; Zhou, X.; Ye, J.; Xu, F.; Zhang, W.; Liao, Y.; Yang, X.
• Is Part Of: Plant biology. Volume 25:Number 1(2023)
• Page Start: 107
• Page End: 118
• Publication Date: 2022-11-30
• Subjects: Abiotic stress -- bioinformatics -- expression pattern -- NAC transcription factors; Botany -- Periodicals; Plants -- genetics -- Periodicals; Plants -- growth & development -- Periodicals; Plant Proteins -- Periodicals; Gene Expression Regulation, Plant -- Periodicals; Botanique -- Périodiques; 580
• DOI: 10.1111/plb.13486
• Languages: English
• ISSNs: 1435-8603

Abstract

ABSTRACT: NAC (NAM, ATAF, CUC2) transcription factors constitute one of the largest families of plant‐specific transcription factors with important roles in plant growth and development and in biotic and abiotic stresses. The physicochemical properties, gene structure, cis ‐acting elements and expression patterns of NAC transcription factors in Ginkgo biloba were analysed using bioinformatics, and expression of this gene family was analysed via quantitative reverse transcription PCR. The family of G. biloba NAC transcription factors had 50 members, distributed on 12 chromosomes and divided into 11 groups. Members in the same group share a similar gene structure and motif distribution. Transcriptome data analysis of G. biloba showed that 35 genes were expressed in eight tissues. Correlation analysis suggested that GbNAC007 and GNAC008 might be involved in flavonoid biosynthesis. Expression levels of 12 GbNAC s under cold, het, and salt stresses were analysed. Results indicate that NAC transcription factors play an important role in response to abiotic stresses. This study provides a reference for the functional analysis of the G. biloba family of NAC transcription factors, as well as a resource for studies on the involvement of this family in responses to abiotic stresses and flavonoid biosynthesis. Abstract : The NAC family had 50 members that were distributed on 12 chromosomes in Ginkgo biloba, GbNAC s play an important role in response to abiotic stresses, and GbNAC007 and GNAC008 might be involved in the flavonoid biosynthesis.