Intolerance of profligacy: an aptamer concentration gradient-tailored unicellular array for high-throughput biologics-mediated phenotyping. Issue 21 (4th October 2022)

• Record Type: Journal Article
• Authors: Zhang, Xuan; Zhao, Ya-Nan; Wei, Xing; Men, Xue; Wu, Cheng-Xin; Bai, Jun-Jie; Yang, Ting; Chen, Ming-Li; Wang, Jian-Hua
• Is Part Of: Lab on a chip. Volume 22:Issue 21(2022)
• Page Start: 4238
• Page End: 4245
• Publication Date: 2022-10-04
• Subjects: Miniature electronic equipment -- Periodicals; Combinatorial chemistry -- Periodicals; Biotechnology -- Periodicals; 543.0813
• DOI: 10.1039/d2lc00729k
• Languages: English
• ISSNs: 1473-0197

Abstract

Abstract : The integration of microfluidic single-cell array and quasi-non-Newtonian fluid concentration gradient generator ensures a substantial saving of precious Apt-probe and facilitates assessment of ITF-β/cisplatin-mediated single-cell/cluster phenotypes. Abstract : In aptamer-based assay schemes, aptamer probes not labeled with biomarkers have to be eliminated before testing, which may lead to a tremendous waste of precious probes. We herein propose a microfluidics system integrating an aptamer concentration gradient generator (Apt-CGG) and a dual single-cell culturing array (D-SCA), termed Mi-Apt-SCA. This facilitates the precise construction of a nanoscale-gradient microenvironment and the high-throughput profiling of single-cell growth/phenotypes in situ with the minimal consumption of Apt-probe. Unlike previous snakelike mixers, the choreographed winding-ravined aptamer dual-spiral micromixer (Apt-WD-mixer) in Apt-CGG could allow thorough blending to generate linear concentration gradients of aptamer (quasi-non-Newtonian fluid) under the action of continuous fluidic wiggles and bidirectional Dean flow. In contrast to other trap-like systems, the mild vortex allows single-cell growth in an ultra-tender fluidic microenvironment using triple-jarless single-cell culture capsules (TriJ-SCCs) in D-SCA (shear stress: 3.43 × 10 −5 dynes per cm 2 ). The minimum dosage of aptamer probe required for exploring PDL1 protein expression in two hepatoma cell lines is only one-900th of that required by conventional protocols. In addition, this approach facilitated the profiling of ITF-β/cisplatin-mediated single-cell/cell-cluster phenotypes.