Common and rare variants in patients with early onset drusen maculopathy. Issue 5 (13th September 2022)

• Record Type: Journal Article
• Authors: de Breuk, Anita; Lechanteur, Yara T. E.; Astuti, Galuh; Galbany, Jordi Corominas; Klaver, Caroline C. W.; Hoyng, Carel B.; den Hollander, Anneke I.
• Is Part Of: Clinical genetics. Volume 102:Issue 5(2022)
• Page Start: 414
• Page End: 423
• Publication Date: 2022-09-13
• Subjects: age‐related macular degeneration -- complement pathway -- early onset drusen maculopathy -- genetic variation -- lipid metabolism -- whole genome sequencing; Medical genetics -- Periodicals; 616.0420
• DOI: 10.1111/cge.14212
• Languages: English
• ISSNs: 0009-9163

Abstract

Abstract: Early onset drusen maculopathy (EODM) can lead to advanced macular degeneration at a young age, affecting quality of life. However, the genetic causes of EODM are not well studied. We performed whole genome sequencing in 49 EODM patients. Common genetic variants were analysed by calculating genetic risk scores based on 52 age‐related macular generation (AMD)‐associated variants, and we analysed rare variants in candidate genes to identify potential deleterious variants that might contribute to EODM development. We demonstrate that the 52 AMD‐associated variants contributed to EODM, especially variants located in the complement pathway. Furthermore, we identified 26 rare genetic variants predicted to be pathogenic based on in silico prediction tools or based on reported pathogenicity in literature. These variants are located predominantly in the complement and lipid metabolism pathways. Last, evaluation of 18 genes causing inherited retinal dystrophies that can mimic AMD characteristics, revealed 11 potential deleterious variants in eight EODM patients. However, phenotypic characteristics did not point towards a retinal dystrophy in these patients. In conclusion, this study reports new insights into rare variants that are potentially involved in EODM development, and which are relevant for future studies unravelling the aetiology of EODM. Abstract :