The complete chloroplast genome sequence of Dendrobium wangliangii (Orchidaceae). Issue 3 (2nd July 2020)

• Record Type: Journal Article
• Authors: Shao, Shi-Cheng; Tang, Lu; Luo, Yan
• Is Part Of: Mitochondrial DNA. Volume 5:Issue 3(2020)
• Page Start: 3495
• Page End: 3497
• Publication Date: 2020-07-02
• Subjects: Dendrobium wangliangii -- chloroplast genome -- phylogenetic analysis Orchidaceae; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2020.1827063
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: Dendrobium wangliangii is a rare orchid species with extremely small populations, endemic to China. In this study, the complete chloroplast (cp) genome sequence and the genome features of D. wangliangii were analyzed. The whole cp genome sequence of D. wangliangii is 160, 052 including a large single-copy region (LSC, 87, 525 bp), a small single-copy region (SSC, 18, 373 bp), and a pair of repeat regions (IRs, 27, 077 bp, each). The contents of four bases in cpDNA were A (30.9%), C (18.9%), G (18.3%) and T (31.9%), respectively. The total content of GC is 37.1%. The cp genome contains 129 genes, consisting of 124 unique genes (78 protein-coding genes, 38 tRNAs, and 8 rRNAs). Phylogenetic analysis showed that D. wangliangii nested with other Dendrobium spp. and was closely related to D. ellipsophyllum, D. wattii and D. longicornu .