Psychroflexus aurantiacus sp. nov., isolated from soil in the Yellow River Delta wetlands. Issue 12 (29th December 2020)

• Record Type: Journal Article
• Authors: Wu, Shu-ge; Wang, Jing-jing; Wang, Jia-ning; Chen, Qi; Sheng, Duo-hong; Li, Yue-zhong
• Is Part Of: International journal of systematic and evolutionary microbiology. Volume 70:Issue 12(2020)
• Page Start: 6284
• Page End: 6293
• Publication Date: 2020-12-29
• Subjects: novel species -- Psychroflexus aurantiacus -- Psychroflexus -- Polyphasic taxonomy; Microbiology -- Periodicals; Microbiology -- Classification -- Periodicals; 579
• DOI: 10.1099/ijsem.0.004527
• Languages: English
• ISSNs: 1466-5026

Abstract

Abstract : A Gram-stain-negative, strictly aerobic, non-motile, orange-coloured bacterium, designated YR1-1 T, was isolated from a soil sample collected from the Yellow River Delta wetlands (PR China). Growth was observed at a salinity of 1.0–15.0 % NaCl, 4–45 °C and pH 6.0–9.0. The results of phylogenetic analysis based on the 16S rRNA gene sequences indicated that YR1-1 T represented a member of the genus Psychroflexus, with the highest sequence similarity to Psychroflexus sediminis YIM-C238 T (97.9 %), followed by Psychroflexus aestuariivivens (97.1 %) and Psychroflexus torquis (96.4 %). The average nucleotide identity and digital DNA–DNA hybridization values between YR1-1 T and other closely related type strains of species of the genus Psychroflexus were 68.7–86.3% and 17.8–30.9 %. The genome of the strain was 2 899 374 bp in length with 39.8 % DNA G+C content. The predominant fatty acids (>10 %) were iso-C15 : 0 and anteiso-C15 : 0 . The major respiratory quinone was menaquinone-6 (MK-6) and the major polar lipids were phosphatidylethanolamine, phospholipid, diphosphatidylglycerol, two unidentified aminolipids and four unidentified lipids. The combined genotypic and phenotypic data indicate that YR1-1 T represents a novel species within the genus Psychroflexus, for which the name Psychroflexus aurantiacus sp. nov., is proposed. The type strain is YR1-1 T (=KCTC 72794 T =CGMCC 1.17458 T ).