Evaluation of the mechanism of Danggui-Shaoyao-San in regulating the metabolome of nephrotic syndrome based on urinary metabonomics and bioinformatics approaches. (28th October 2020)
- Record Type:
- Journal Article
- Title:
- Evaluation of the mechanism of Danggui-Shaoyao-San in regulating the metabolome of nephrotic syndrome based on urinary metabonomics and bioinformatics approaches. (28th October 2020)
- Main Title:
- Evaluation of the mechanism of Danggui-Shaoyao-San in regulating the metabolome of nephrotic syndrome based on urinary metabonomics and bioinformatics approaches
- Authors:
- Wang, Yunlai
Fan, Shengnan
Yang, Mo
Shi, Gaoxiang
Hu, Siyao
Yin, Dengke
Zhang, Yazhong
Xu, Fan - Abstract:
- Abstract: Ethnopharmacological relevance: Danggui-Shaoyao-San (DSS), a well-known classic Traditional Chinese medicine (TCM) formula for enhancing Qi (vital energy and spirit), invigorating blood circulation and promoting diuresis, has been widely used in the treatment of nephrotic syndrome (NS). Previously, we have reported some protective effects of DSS against NS, but the in-depth mechanisms remain unclear. Aim of the study: In this study, an ultra performance liquid chromatography coupled with quadrupole-time-of-flight mass spectrometry (UPLC-Q/TOF-MS)-based urinary metabonomics coupled with bioinformatics method was employed to evaluate the mechanisms of DSS in treating NS from the perspective of metabolism. Materials and methods: The rat models of NS were established using adriamycin injection. The regulative effects of DSS on NS in rats were first assessed by non-targeted metabonomics, which was based on UPLC-Q/TOF-MS. A series of target prediction models were used to predict the target of components identified in DSS and potential metabolites in NS, combined with the experimental results of metabonomics, to construct the biological network. Results: A total of 16 potential metabolites were screened in NS, of which 13 were significantly regulated by DSS. Metabolic pathway analysis showed that the therapeutic effect of DSS on NS was mainly involved in regulating the amino acid metabolism and energy metabolism. The component-target-metabolites-pathway network revealedAbstract: Ethnopharmacological relevance: Danggui-Shaoyao-San (DSS), a well-known classic Traditional Chinese medicine (TCM) formula for enhancing Qi (vital energy and spirit), invigorating blood circulation and promoting diuresis, has been widely used in the treatment of nephrotic syndrome (NS). Previously, we have reported some protective effects of DSS against NS, but the in-depth mechanisms remain unclear. Aim of the study: In this study, an ultra performance liquid chromatography coupled with quadrupole-time-of-flight mass spectrometry (UPLC-Q/TOF-MS)-based urinary metabonomics coupled with bioinformatics method was employed to evaluate the mechanisms of DSS in treating NS from the perspective of metabolism. Materials and methods: The rat models of NS were established using adriamycin injection. The regulative effects of DSS on NS in rats were first assessed by non-targeted metabonomics, which was based on UPLC-Q/TOF-MS. A series of target prediction models were used to predict the target of components identified in DSS and potential metabolites in NS, combined with the experimental results of metabonomics, to construct the biological network. Results: A total of 16 potential metabolites were screened in NS, of which 13 were significantly regulated by DSS. Metabolic pathway analysis showed that the therapeutic effect of DSS on NS was mainly involved in regulating the amino acid metabolism and energy metabolism. The component-target-metabolites-pathway network revealed 29 targets associated with metabolites that were linked to 27 components of DSS. Bioinformatics analysis showed that the potential targets have various molecular functions (especially serine-type endopeptidase inhibitor activity) and biological process (such as positive regulation of peptidyl-tyrosine phosphorylation or autophosphorylation). Conclusions: The regulation of disrupted metabolic pathways and the relative targets may be the mechanism for DSS in the treatment of NS. Notably, metabonomics coupled with bioinformatics would be useful to explore the mechanism of DSS against NS and provide better insights on DSS for clinical use. Graphical abstract: Image 1 Highlights: DSS showed protective effects against NS based on urinary metabonomics. DSS showed multi-target and multi-pathway mechanisms on the treatment of NS based on bioinformatics. Disorders of amino acid metabolism and down regulation of energy metabolism may contribute to NS. The combination of metabonomics and bioinformatics will provide a promising strategy for TCM. … (more)
- Is Part Of:
- Journal of ethnopharmacology. Volume 261(2020)
- Journal:
- Journal of ethnopharmacology
- Issue:
- Volume 261(2020)
- Issue Display:
- Volume 261, Issue 2020 (2020)
- Year:
- 2020
- Volume:
- 261
- Issue:
- 2020
- Issue Sort Value:
- 2020-0261-2020-0000
- Page Start:
- Page End:
- Publication Date:
- 2020-10-28
- Subjects:
- Danggui-shaoyao-san -- Nephrotic syndrome -- UPLC-Q/TOF-MS -- Urinary metabonomics -- Bioinformatics
DSS Danggui-Shaoyao-San -- TCM Traditional Chinese medicine -- NS nephrotic syndrome -- UPLC-Q/TOF-MS ultra performance liquid chromatography coupled with quadrupole-time-of-flight mass spectrometry -- ADR adriamycin -- GO Gene Ontology -- BAH blood-associated herbs -- WAH water-associated herbs -- QC quality control -- PCA principal component analysis -- PLS-DA partial least squares-discriminate analysis -- VIP variable importance in the projection -- PPI protein-protein interaction -- TIC total ion chromatograms -- PTGS2 prostaglandin G/H synthase 2 -- FGF2 fibroblast growth factor 2 -- TNF tumor necrosis factor -- SERPINE1 serpin family E member 1 -- IL2 interleukin 2 -- ACE angiotensin-converting enzyme -- CK creatine kinase
Ethnopharmacology -- Periodicals
Pharmacognosy -- Periodicals
Herbs -- Periodicals
Herbs -- Periodicals
Pharmacognosy -- Periodicals
Pharmacognosie -- Périodiques
Herbes -- Périodiques
615.1 - Journal URLs:
- http://www.sciencedirect.com/science/journal/03788741 ↗
http://www.elsevier.com/journals ↗ - DOI:
- 10.1016/j.jep.2020.113020 ↗
- Languages:
- English
- ISSNs:
- 0378-8741
- Deposit Type:
- Legaldeposit
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- Available online (eLD content is only available in our Reading Rooms) ↗
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- British Library DSC - 4979.602400
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