Investigation of Pokemon-Regulated Proteins in Hepatocellular Carcinoma Using Mass Spectrometry-Based Multiplex Quantitative Proteomics. Issue 2 (April 2013)
- Record Type:
- Journal Article
- Title:
- Investigation of Pokemon-Regulated Proteins in Hepatocellular Carcinoma Using Mass Spectrometry-Based Multiplex Quantitative Proteomics. Issue 2 (April 2013)
- Main Title:
- Investigation of Pokemon-Regulated Proteins in Hepatocellular Carcinoma Using Mass Spectrometry-Based Multiplex Quantitative Proteomics
- Authors:
- Bi, Xin
Jin, Yibao
Gao, Xiang
Liu, Feng
Gao, Dan
Jiang, Yuyang
Liu, Hongxia - Abstract:
- Pokemon is a transcription regulator involved in embryonic development, cellular differentiation and oncogenesis. It is aberrantly overexpressed in multiple human cancers including Hepatocellular carcinoma (HCC) and is considered as a promising biomarker for HCC. In this work, the isobaric tags for relative and absolute quantitation (iTRAQ)-based quantitative proteomics strategy was used to investigate the proteomic profile associated with Pokemon in human HCC cell line QGY7703 and human hepatocyte line HL7702. Samples were labeled with four-plex iTRAQ reagents followed by two-dimensional liquid chromatography coupled with tandem mass spectrometry analysis. A total of 24 differentially expressed proteins were selected as significant. Nine proteins were potentially up-regulated by Pokemon while 15 proteins were potentially down-regulated and many proteins were previously identified as potential biomarkers for HCC. Gene ontology (GO) term enrichment revealed that the listed proteins were mainly involved in DNA metabolism and biosynthesis process. The changes of glucose-6-phosphate 1-dehydrogenase (G6PD, up-regulated) and ribonucleoside-diphosphate reductase large sub-unit (RIM1, down-regulated) were validated by Western blotting analysis and denoted as Pokemon's function of oncogenesis. We also found that Pokemon potentially repressed the expression of highly clustered proteins (MCM3, MCM5, MCM6, MCM7) which played key roles in promoting DNA replication. Altogether, ourPokemon is a transcription regulator involved in embryonic development, cellular differentiation and oncogenesis. It is aberrantly overexpressed in multiple human cancers including Hepatocellular carcinoma (HCC) and is considered as a promising biomarker for HCC. In this work, the isobaric tags for relative and absolute quantitation (iTRAQ)-based quantitative proteomics strategy was used to investigate the proteomic profile associated with Pokemon in human HCC cell line QGY7703 and human hepatocyte line HL7702. Samples were labeled with four-plex iTRAQ reagents followed by two-dimensional liquid chromatography coupled with tandem mass spectrometry analysis. A total of 24 differentially expressed proteins were selected as significant. Nine proteins were potentially up-regulated by Pokemon while 15 proteins were potentially down-regulated and many proteins were previously identified as potential biomarkers for HCC. Gene ontology (GO) term enrichment revealed that the listed proteins were mainly involved in DNA metabolism and biosynthesis process. The changes of glucose-6-phosphate 1-dehydrogenase (G6PD, up-regulated) and ribonucleoside-diphosphate reductase large sub-unit (RIM1, down-regulated) were validated by Western blotting analysis and denoted as Pokemon's function of oncogenesis. We also found that Pokemon potentially repressed the expression of highly clustered proteins (MCM3, MCM5, MCM6, MCM7) which played key roles in promoting DNA replication. Altogether, our results may help better understand the role of Pokemon in HCC and promote the clinical applications. … (more)
- Is Part Of:
- European journal of mass spectrometry. Volume 19:Issue 2(2013)
- Journal:
- European journal of mass spectrometry
- Issue:
- Volume 19:Issue 2(2013)
- Issue Display:
- Volume 19, Issue 2 (2013)
- Year:
- 2013
- Volume:
- 19
- Issue:
- 2
- Issue Sort Value:
- 2013-0019-0002-0000
- Page Start:
- 111
- Page End:
- 121
- Publication Date:
- 2013-04
- Subjects:
- Pokemon -- 2D LC-MS/MS -- hepatocellular carcinoma -- isobaric tags for relative and absolute quantitation (iTRAQ) -- quantitative proteomics -- gene ontology
Mass spectrometry -- Periodicals
Mass Spectrometry
Mass spectrometry
Periodicals
Periodicals
543.6505 - Journal URLs:
- http://www.impub.co.uk/ems.html ↗
http://journals.sagepub.com/toc/EMS/current ↗
http://www.uk.sagepub.com/home.nav ↗ - DOI:
- 10.1255/ejms.1221 ↗
- Languages:
- English
- ISSNs:
- 1469-0667
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 23542.xml