Accelerating GluCEST imaging using deep learning for B0 correction. Issue 4 (17th April 2020)

• Record Type: Journal Article
• Authors: Li, Yiran; Xie, Danfeng; Cember, Abigail; Nanga, Ravi Prakash Reddy; Yang, Hanlu; Kumar, Dushyant; Hariharan, Hari; Bai, Li; Detre, John A.; Reddy, Ravinder; Wang, Ze
• Is Part Of: Magnetic resonance in medicine. Volume 84:Issue 4(2020)
• Page Start: 1724
• Page End: 1733
• Publication Date: 2020-04-17
• Subjects: deep learning -- deep residual network -- GluCEST -- wide activation; Nuclear magnetic resonance -- Periodicals; Electron paramagnetic resonance -- Periodicals; 616.07548
• DOI: 10.1002/mrm.28289
• Languages: English
• ISSNs: 0740-3194

Abstract

Abstract : Purpose: Glutamate weighted Chemical Exchange Saturation Transfer (GluCEST) MRI is a noninvasive technique for mapping parenchymal glutamate in the brain. Because of the sensitivity to field (B0 ) inhomogeneity, the total acquisition time is prolonged due to the repeated image acquisitions at several saturation offset frequencies, which can cause practical issues such as increased sensitivity to patient motions. Because GluCEST signal is derived from the small z‐spectrum difference, it often has a low signal‐to‐noise‐ratio (SNR). We proposed a novel deep learning (DL)‐based algorithm armed with wide activation neural network blocks to address both issues. Methods: B0 correction based on reduced saturation offset acquisitions was performed for the positive and negative sides of the z‐spectrum separately. For each side, a separate deep residual network was trained to learn the nonlinear mapping from few CEST‐weighted images acquired at different ppm values to the one at 3 ppm (where GluCEST peaks) in the same side of the z‐spectrum. Results: All DL‐based methods outperformed the "traditional" method visually and quantitatively. The wide activation blocks‐based method showed the highest performance in terms of Structural Similarity Index (SSIM) and peak signal‐to‐noise ratio (PSNR), which were 0.84 and 25dB respectively. SNR increases in regions of interest were over 8dB. Conclusion: We demonstrated that the new DL‐based method can reduce the entire GluCEST imaging time by ˜50% and yield higher SNR than current state‐of‐the‐art.