Homology modeling, docking, molecular dynamics and in vitro studies to identify Rhipicephalus microplus acetylcholinesterase inhibitors. Issue 15 (29th August 2022)

• Record Type: Journal Article
• Authors: Cerqueira, Amanda Ponce Morais; Santana, Isis Bugia; Araújo, Janay Stefany Carneiro; Lima, Hélimar Gonçalves; Batatinha, Maria José Moreira; Branco, Alexsandro; Santos Junior, Manoelito Coelho dos; Botura, Mariana Borges
• Is Part Of: Journal of biomolecular structure & dynamics. Volume 40:Issue 15(2022)
• Page Start: 6787
• Page End: 6797
• Publication Date: 2022-08-29
• Subjects: Rhipicephalus microplus -- acetylcholinesterase -- homology modeling -- flavonoid -- acaricidal activity; Biomolecules -- Periodicals; Molecular structure -- Periodicals; Molecular Biology -- Periodicals; Biomechanics -- Periodicals; 572
• DOI: 10.1080/07391102.2021.1889666
• Languages: English
• ISSNs: 0739-1102

Abstract

Abstract: Rhipicephalus microplus is an important ectoparasite of cattle, causing considerable economical losses. Resistance to chemical acaricides has stimulated the search for new antiparasitic drugs, including natural products as an eco-friendly alternative of control. Flavonoids represent a class of natural compounds with many biological activities, such as enzyme inhibitors. Acetylcholinesterase is an essential enzyme for tick survival that stands out as an important target for the development of acaricides. This work aimed to predict this 3D structure by homology modeling and use the model to identify compound with inhibitory activity. The model of R. microplus AChE1 ( Rm AChE1) was constructed using MODELLER program. The optimization and molecular dynamic investigation were performed in GROMACS program. The model developed was used, by molecular docking, to evaluate the anticholinesterase activity of flavonoids (quercetin, rutin, diosmin, naringin and hesperidin) and an acaricide synthetic (eserine). Additionally, in vitro inhibition of AChE and larval immersion tests were performed. The model of Rm AChE1 showed to be sterically and energetically acceptable. In molecular dynamics simulations, the 3D structure remains stable with Root Mean Square Deviation = 3.58 Å and Root Mean Square Fluctuation = 1.43 Å. In molecular docking analyses, only eserine and quercetin show affinity energy to the Rm AChE (Gridscore: −52.17 and −39.44 kcal/mol, respectively). Among the flavonoids, quercetin exhibited the best in vitro inhibition of AChE activity (15.8%) and mortality of larvae tick (30.2%). The use of in silico and in vitro techniques has shown that quercetin showed promising anti-tick activity and structural requirements to interact with Rm AChE1. Communicated by Ramaswamy H. Sarma