ProTrack: An Interactive Multi‐Omics Data Browser for Proteogenomic Studies. Issue 21 (6th August 2020)

• Record Type: Journal Article
• Authors: Calinawan, Anna Pamela; Song, Xiaoyu; Ji, Jiayi; Dhanasekaran, Saravana Mohan; Petralia, Francesca; Wang, Pei; Reva, Boris
• Other Names: Wen Bo guestEditor.; Zhang Bing guestEditor.
• Is Part Of: Proteomics. Volume 20:Issue 21/22(2020)
• Page Start: n/a
• Page End: n/a
• Publication Date: 2020-08-06
• Subjects: Proteins -- Separation -- Periodicals; Bioinformatics -- Periodicals; Proteomics -- Periodicals; Genomes -- Periodicals; Molecular genetics -- Periodicals; 572.605
• DOI: 10.1002/pmic.201900359
• Languages: English
• ISSNs: 1615-9853

Abstract

Abstract: The Clinical Proteomic Tumor Analysis Consortium (CPTAC) initiative has generated extensive multi‐omics data resources of deep proteogenomic profiles for multiple cancer types. To enable the broader community of biological and medical researchers to intuitively query, explore, and download data and analysis results from various CPTAC projects, a prototype user‐friendly web application called "ProTrack" is built with the CPTAC clear cell renal cell carcinoma (ccRCC) data set (http://ccrcc.cptac-data-view.org ). Here the salient features of this application which provides a dynamic, comprehensive, and granular visualization of the rich proteogenomic data is described.