A personalized deep learning denoising strategy for low-count PET images. (21st July 2022)

• Record Type: Journal Article
• Authors: Liu, Qiong; Liu, Hui; Mirian, Niloufar; Ren, Sijin; Viswanath, Varsha; Karp, Joel; Surti, Suleman; Liu, Chi
• Is Part Of: Physics in medicine & biology. Volume 67:Number 14(2022)
• Publication Date: 2022-07-21
• Subjects: noise level disparity -- deep learning -- personalized denoising -- low count PET; Biophysics -- Periodicals; Medical physics -- Periodicals; 610.153
• DOI: 10.1088/1361-6560/ac783d
• Languages: English
• ISSNs: 0031-9155

Abstract

Abstract: Objective . Deep learning denoising networks are typically trained with images that are representative of the testing data. Due to the large variability of the noise levels in positron emission tomography (PET) images, it is challenging to develop a proper training set for general clinical use. Our work aims to develop a personalized denoising strategy for the low-count PET images at various noise levels. Approach. We first investigated the impact of the noise level in the training images on the model performance. Five 3D U-Net models were trained on five groups of images at different noise levels, and a one-size-fits-all model was trained on images covering a wider range of noise levels. We then developed a personalized weighting method by linearly blending the results from two models trained on 20%-count level images and 60%-count level images to balance the trade-off between noise reduction and spatial blurring. By adjusting the weighting factor, denoising can be conducted in a personalized and task-dependent way. Main results. The evaluation results of the six models showed that models trained on noisier images had better performance in denoising but introduced more spatial blurriness, and the one-size-fits-all model did not generalize well when deployed for testing images with a wide range of noise levels. The personalized denoising results showed that noisier images require higher weights on noise reduction to maximize the structural similarity and mean squared error. And model trained on 20%-count level images can produce the best liver lesion detectability. Significance. Our study demonstrated that in deep learning-based low dose PET denoising, noise levels in the training input images have a substantial impact on the model performance. The proposed personalized denoising strategy utilized two training sets to overcome the drawbacks introduced by each individual network and provided a series of denoised results for clinical reading.