Genome-wide identification and expression analysis of SABATH methyltransferases in tea plant (Camellia sinensis): insights into their roles in plant defense responses. (2nd October 2020)
- Record Type:
- Journal Article
- Title:
- Genome-wide identification and expression analysis of SABATH methyltransferases in tea plant (Camellia sinensis): insights into their roles in plant defense responses. (2nd October 2020)
- Main Title:
- Genome-wide identification and expression analysis of SABATH methyltransferases in tea plant (Camellia sinensis): insights into their roles in plant defense responses
- Authors:
- Guo, Yan
Qiao, Dahe
Yang, Chun
Chen, Juan
Li, Yan
Liang, Sihui
Lin, Kaiqin
Chen, Zhengwu - Abstract:
- ABSTRACT: SABATH methyltransferases convent plant small-molecule metabolites into volatile methyl esters, which play important roles in many biological processes and defense reactions in plants. In this study, a total of 32 SABATH genes were identified in the Camellia sinensis var. sinensis (CSS) genome, which were renamed CsSABATH1 to CsSABATH32. Genome location annotation suggested that tandem duplication was responsible for the expansion of SABATH genes in tea plant. Multiple sequence alignment and phylogenetic analysis showed that the CsSABATHs could be classified into three groups (I, II and III), which were also supported by gene structures and conserved motifs analysis. Group II contained only two CsSABATH proteins, which were closely related to PtIAMT, AtIAMT and OsIAMT. The group III SABATH genes of tea plant exhibited expansion on the CSS genome compared with Camellia sinensis var. assamica (CSA) genome. Based on RNA-seq data, the CsSABATHs exhibited tissue-specific expression patterns, and the members with high expression in buds and young leaves were also obviously upregulated after MeJA treatment. The expression of many transcription factors was significantly correlated with that of different members of the CsSABATH gene family, suggesting a potential regulatory relationship between them. Quantitative real-time PCR (qPCR) expression analysis showed that CsSABATHs could respond to exogenous JA, SA and MeSA treatments in tea plants. RNA-seq data analysis and qPCRABSTRACT: SABATH methyltransferases convent plant small-molecule metabolites into volatile methyl esters, which play important roles in many biological processes and defense reactions in plants. In this study, a total of 32 SABATH genes were identified in the Camellia sinensis var. sinensis (CSS) genome, which were renamed CsSABATH1 to CsSABATH32. Genome location annotation suggested that tandem duplication was responsible for the expansion of SABATH genes in tea plant. Multiple sequence alignment and phylogenetic analysis showed that the CsSABATHs could be classified into three groups (I, II and III), which were also supported by gene structures and conserved motifs analysis. Group II contained only two CsSABATH proteins, which were closely related to PtIAMT, AtIAMT and OsIAMT. The group III SABATH genes of tea plant exhibited expansion on the CSS genome compared with Camellia sinensis var. assamica (CSA) genome. Based on RNA-seq data, the CsSABATHs exhibited tissue-specific expression patterns, and the members with high expression in buds and young leaves were also obviously upregulated after MeJA treatment. The expression of many transcription factors was significantly correlated with that of different members of the CsSABATH gene family, suggesting a potential regulatory relationship between them. Quantitative real-time PCR (qPCR) expression analysis showed that CsSABATHs could respond to exogenous JA, SA and MeSA treatments in tea plants. RNA-seq data analysis and qPCR validation suggested that CsSABATH8, 11, 16, 25, 29 and 32 might play a special role in plant defense against insect herbivory. These results provide references for evolutionary studies of the plant SABATH family and the exploration of the potential roles of CsSABATHs in tea plant defense responses. … (more)
- Is Part Of:
- Plant signaling & behavior. Volume 15:Number 10(2020)
- Journal:
- Plant signaling & behavior
- Issue:
- Volume 15:Number 10(2020)
- Issue Display:
- Volume 15, Issue 10 (2020)
- Year:
- 2020
- Volume:
- 15
- Issue:
- 10
- Issue Sort Value:
- 2020-0015-0010-0000
- Page Start:
- Page End:
- Publication Date:
- 2020-10-02
- Subjects:
- Camellia sinensis -- SABATH gene family -- methyltransferase -- plant defense -- MeSA
Plant ecophysiology -- Periodicals
Plant cellular signal transduction -- Periodicals
Plant cellular signal transduction
Plant ecophysiology
Periodicals
Electronic journals
581 - Journal URLs:
- http://www.landesbioscience.com/journals/psb/ ↗
http://www.tandfonline.com/toc/kpsb20/current ↗
http://www.tandfonline.com/ ↗ - DOI:
- 10.1080/15592324.2020.1804684 ↗
- Languages:
- English
- ISSNs:
- 1559-2316
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
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- British Library DSC - BLDSS-3PM
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- 22476.xml