Transcriptomic profiling of fetal membranes of mice deficient in biglycan and decorin as a model of preterm birth. Issue 3 (9th November 2020)
- Record Type:
- Journal Article
- Title:
- Transcriptomic profiling of fetal membranes of mice deficient in biglycan and decorin as a model of preterm birth. Issue 3 (9th November 2020)
- Main Title:
- Transcriptomic profiling of fetal membranes of mice deficient in biglycan and decorin as a model of preterm birth
- Authors:
- Pantham, Priyadarshini
Armstrong, Don L
Bodnariuc, Jonathan
Haupt, Owen
Johnson, Amy Wagoner
Underhill, Lori
Iozzo, Renato V
Lechner, Beatrice E
Wildman, Derek E - Abstract:
- Abstract: Approximately, 25% of all preterm births are due to preterm premature rupture of membranes. Mice deficient in proteoglycans biglycan ( Bgn ) and decorin ( Dcn) display abnormal fetal membranes and increased incidence of preterm birth. We conducted RNA-Seq to profile fetal membranes and identify molecular pathways that may lead to preterm birth in double knockout (DKO) mice ( Bgn −/− ; Dcn −/− ) compared to wild-type (WT) at two different gestational stages, E12 and E18 ( n = 3 in each group). 3264 transcripts were differentially regulated in E18 DKO vs. WT fetal membranes, and 96 transcripts differentially regulated in E12 DKO vs. WT fetal membranes (FDR < 0.05, log 2 FC ≥ 1). Differentially regulated transcripts in E18 DKO fetal membranes were significantly enriched for genes involved in cell cycle regulation, extracellular matrix–receptor interaction, and the complement cascade. Fifty transcripts involved in the cell cycle were altered in E18 DKO fetal membranes (40↓, 10↑, FDR < 0.05), including p21 and p57 (↑), and Tgfb2, Smad3, CycA, Cdk1, and Cdk2 (↓). Thirty-one transcripts involved in the complement cascade were altered (11↓, 20↑, FDR < 0.05) in E18 DKO fetal membranes, including C1q, C2, and C3 (↑). Differentially expressed genes in the top three molecular pathways (1) showed evidence of negative or purifying selection, and (2) were significantly enriched ( Z -score > 10) for transcription factor binding sites for Nr2f1 at E18. We propose that in DKO mice,Abstract: Approximately, 25% of all preterm births are due to preterm premature rupture of membranes. Mice deficient in proteoglycans biglycan ( Bgn ) and decorin ( Dcn) display abnormal fetal membranes and increased incidence of preterm birth. We conducted RNA-Seq to profile fetal membranes and identify molecular pathways that may lead to preterm birth in double knockout (DKO) mice ( Bgn −/− ; Dcn −/− ) compared to wild-type (WT) at two different gestational stages, E12 and E18 ( n = 3 in each group). 3264 transcripts were differentially regulated in E18 DKO vs. WT fetal membranes, and 96 transcripts differentially regulated in E12 DKO vs. WT fetal membranes (FDR < 0.05, log 2 FC ≥ 1). Differentially regulated transcripts in E18 DKO fetal membranes were significantly enriched for genes involved in cell cycle regulation, extracellular matrix–receptor interaction, and the complement cascade. Fifty transcripts involved in the cell cycle were altered in E18 DKO fetal membranes (40↓, 10↑, FDR < 0.05), including p21 and p57 (↑), and Tgfb2, Smad3, CycA, Cdk1, and Cdk2 (↓). Thirty-one transcripts involved in the complement cascade were altered (11↓, 20↑, FDR < 0.05) in E18 DKO fetal membranes, including C1q, C2, and C3 (↑). Differentially expressed genes in the top three molecular pathways (1) showed evidence of negative or purifying selection, and (2) were significantly enriched ( Z -score > 10) for transcription factor binding sites for Nr2f1 at E18. We propose that in DKO mice, cell cycle arrest results in lack of cell proliferation in fetal membranes, inability to contain the growing fetus, and preterm birth. Abstract : We have conducted transcriptomic profiling of fetal membranes from mice deficient in biglycan and decorin and identified molecular pathways of interest. … (more)
- Is Part Of:
- Biology of reproduction. Volume 104:Issue 3(2021)
- Journal:
- Biology of reproduction
- Issue:
- Volume 104:Issue 3(2021)
- Issue Display:
- Volume 104, Issue 3 (2021)
- Year:
- 2021
- Volume:
- 104
- Issue:
- 3
- Issue Sort Value:
- 2021-0104-0003-0000
- Page Start:
- 611
- Page End:
- 623
- Publication Date:
- 2020-11-09
- Subjects:
- amnion -- biglycan -- decorin -- preterm -- proteoglycan -- fetal membranes
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http://firstsearch.oclc.org/journal=0006-3363;screen=info;ECOIP ↗ - DOI:
- 10.1093/biolre/ioaa205 ↗
- Languages:
- English
- ISSNs:
- 0006-3363
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