The complete chloroplast genome of Echeveria lilacina Kimnach & Moran 1980 (Saxifragales: Crassulaceae). Issue 5 (4th May 2022)

• Record Type: Journal Article
• Authors: Nah, Gyoungju; Jeong, Ji Ran; Lee, Jae Hwan; Soh, Soon Yil; Nam, Sang Yong
• Is Part Of: Mitochondrial DNA. Volume 7:Issue 5(2022)
• Page Start: 889
• Page End: 891
• Publication Date: 2022-05-04
• Subjects: Echeveria lilacina -- Crassulaceae -- complete chloroplast genome -- next generation sequencing -- phylogenetic analysis; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2022.2077668
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: Echeveria lilacina Kimnach & Moran 1980 is a succulent plant having ornamental and ecological importance. In this study, the first complete chloroplast genome of Echeveria lilacina, a species belonging to the Crassulaceae family, was characterized from the de novo assembly of Illumina NovaSeq 6000 paired-end sequencing data. The chloroplast genome of E. lilacina is 150, 080 bp in length, which includes a large single-copy (LSC) region of 81, 741 bp, a small single-copy (SSC) region of 16, 747 bp, and a pair of identical inverted repeat regions (IRs) of 25, 796 bp each. The genome annotation revealed a total of 138 genes, including 87 protein-coding genes, 41 transfer RNA (tRNA) genes, and 10 ribosomal RNA (rRNA) genes. The phylogenetic analysis with 15 complete chloroplast genome sequences including outgroup showed that E. lilacina formed the closest taxonomical relationship with Graptopetalum amethystinum in the Crassulaceae family.