Molecular Characterization of Carbapenem-Resistant Enterobacteriaceae in the USA, 2011–2015. (4th October 2017)
- Record Type:
- Journal Article
- Title:
- Molecular Characterization of Carbapenem-Resistant Enterobacteriaceae in the USA, 2011–2015. (4th October 2017)
- Main Title:
- Molecular Characterization of Carbapenem-Resistant Enterobacteriaceae in the USA, 2011–2015
- Authors:
- Ansari, Uzma
Lawsin, Adrian
Campbell, Davina
Albrecht, Valerie
McAllister, Gillian
Bulens, Sandra
Walters, Maroya Spalding
Jacob, Jesse T
Satola, Sarah W
Wilson, Lucy E
Lynfield, Ruth
Vagnone, Paula M Snippes
Janelle, Sarah J
Xavier, Karen
Dumyati, Ghinwa
Hardy, Dwight
Phipps, Erin C
Culbreath, Karissa
Beldavs, Zintars
Morey, Karim
Kainer, Marion A
Roberts, Sheri
Kallen, Alexander
Rasheed, J Kamile
Karlsson, Maria S - Abstract:
- Abstract: Background: Carbapenem-resistant Enterobacteriaceae (CRE) have emerged as an important cause of healthcare-associated infections. We characterized the molecular epidemiology of CRE in isolates collected through the Emerging Infections Program (EIP) at the Centers for Disease Control and Prevention (CDC). Methods: From 2011–2015, 8 U.S. EIP sites (CO, GA, MD, MN, NY, NM, TN and OR) collected CRE ( Escherichia coli, Enterobacter aerogenes, Enterobacter cloacae complex, Klebsiella pneumoniae, and Klebsiella oxytoca) isolated from a normally sterile site or urine. Isolates were sent to CDC for reference antimicrobial susceptibility testing and real-time PCR detection of carbapenemase genes ( bla KPC, bla NDM, bla OXA-48 ). Phenotypically confirmed CRE were analyzed by whole genome sequencing (WGS) using an Illumina MiSeq benchtop sequencer. Results: Among 639 Enterobacteriaceae evaluated, 414 (65%) were phenotypically confirmed as CRE using CDC's current surveillance definition (resistant to ertapenem, imipenem, doripenem, or meropenem). Among isolates confirmed as CRE, 303 (73%) were carbapenemase-producers (CP-CRE). The majority of CP-CRE originated from GA (39%), MD (35%) and MN (11%); most non-CP-CREs originated from MN (27%), CO (25%) and OR (17%). K. pneumoniae was the predominant carbapenemase-producing species (78%) followed by E. cloacae complex spp (12%), E. coli (7.9%), E . A erogenes (0.9%) and K. oxytoca (0.6%). The most common carbapenemase genes detectedAbstract: Background: Carbapenem-resistant Enterobacteriaceae (CRE) have emerged as an important cause of healthcare-associated infections. We characterized the molecular epidemiology of CRE in isolates collected through the Emerging Infections Program (EIP) at the Centers for Disease Control and Prevention (CDC). Methods: From 2011–2015, 8 U.S. EIP sites (CO, GA, MD, MN, NY, NM, TN and OR) collected CRE ( Escherichia coli, Enterobacter aerogenes, Enterobacter cloacae complex, Klebsiella pneumoniae, and Klebsiella oxytoca) isolated from a normally sterile site or urine. Isolates were sent to CDC for reference antimicrobial susceptibility testing and real-time PCR detection of carbapenemase genes ( bla KPC, bla NDM, bla OXA-48 ). Phenotypically confirmed CRE were analyzed by whole genome sequencing (WGS) using an Illumina MiSeq benchtop sequencer. Results: Among 639 Enterobacteriaceae evaluated, 414 (65%) were phenotypically confirmed as CRE using CDC's current surveillance definition (resistant to ertapenem, imipenem, doripenem, or meropenem). Among isolates confirmed as CRE, 303 (73%) were carbapenemase-producers (CP-CRE). The majority of CP-CRE originated from GA (39%), MD (35%) and MN (11%); most non-CP-CREs originated from MN (27%), CO (25%) and OR (17%). K. pneumoniae was the predominant carbapenemase-producing species (78%) followed by E. cloacae complex spp (12%), E. coli (7.9%), E . A erogenes (0.9%) and K. oxytoca (0.6%). The most common carbapenemase genes detected were bla KPC-3 (76%) and bla KPC-2 (19%); bla NDM and bla OXA-48 -like genes were detected in 1.6% and 0.3% of isolates, respectively. For carbapenemase-producing K. pneumoniae, Enterobacter spp, and E. coli, the predominant sequence types (ST) were ST258 (65%), ST171 (35%) and ST131 (29%), respectively. Conclusion: The distribution of CP and non-CP-CRE varied across the catchment sites. Among CP-CRE, KPC-producing K. pneumoniae predominated; other carbapenemases were rarely identified in the locations under surveillance. Strain types known to have increased epidemic potential (ST258 and ST131) were common among carbapenemase-producing K. pneumoniae and E. coli isolates, respectively. Disclosures: All authors: No reported disclosures. … (more)
- Is Part Of:
- Open forum infectious diseases. Volume 4(2017)Supplement 1
- Journal:
- Open forum infectious diseases
- Issue:
- Volume 4(2017)Supplement 1
- Issue Display:
- Volume 4, Issue 1 (2017)
- Year:
- 2017
- Volume:
- 4
- Issue:
- 1
- Issue Sort Value:
- 2017-0004-0001-0000
- Page Start:
- S179
- Page End:
- S179
- Publication Date:
- 2017-10-04
- Subjects:
- Communicable diseases -- Periodicals
Medical microbiology -- Periodicals
Infection -- Periodicals
616.9 - Journal URLs:
- http://ofid.oxfordjournals.org/ ↗
http://www.oxfordjournals.org/en/ ↗ - DOI:
- 10.1093/ofid/ofx163.328 ↗
- Languages:
- English
- ISSNs:
- 2328-8957
- Deposit Type:
- Legaldeposit
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- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 21330.xml