Validation and utility of ARDS subphenotypes identified by machine-learning models using clinical data: an observational, multicohort, retrospective analysis. Issue 4 (April 2022)

• Record Type: Journal Article
• Authors: Maddali, Manoj V; Churpek, Matthew; Pham, Tai; Rezoagli, Emanuele; Zhuo, Hanjing; Zhao, Wendi; He, June; Delucchi, Kevin L; Wang, Chunxue; Wickersham, Nancy; McNeil, J Brennan; Jauregui, Alejandra; Ke, Serena; Vessel, Kathryn; Gomez, Antonio; Hendrickson, Carolyn M; Kangelaris, Kirsten N; Sarma, Aartik; Leligdowicz, Aleksandra; Liu, Kathleen D; Matthay, Michael A; Ware, Lorraine B; Laffey, John G; Bellani, Giacomo; Calfee, Carolyn S; Sinha, Pratik; Rios, Fernando; Van Haren, Frank; Sottiaux, T; Lora, Fredy S; Azevedo, Luciano C; Depuydt, P; Fan, Eddy; Bugedo, Guillermo; Qiu, Haibo; Gonzalez, Marcos; Silesky, Juan; Cerny, Vladimir; Nielsen, Jonas; Jibaja, Manuel; Pham, Tài; Wrigge, Hermann; Matamis, Dimitrios; Ranero, Jorge Luis; Hashemian, S. M; Amin, Pravin; Clarkson, Kevin; Bellani, Giacomo; Kurahashi, Kiyoyasu; Villagomez, Asisclo; Zeggwagh, Amine Ali; Heunks, Leo M; Laake, Jon Henrik; Palo, Jose Emmanuel; do Vale Fernandes, Antero; Sandesc, Dorel; Arabi, Yaasen; Bumbasierevic, Vesna; Nin, Nicolas; Lorente, Jose A; Larsson, Anders; Piquilloud, Lise; Abroug, Fekri; McAuley, Daniel F; McNamee, Lia; Hurtado, Javier; Bajwa, Ed; Démpaire, Gabriel; Francois, Guy M; Sula, Hektor; Nunci, Lordian; Cani, Alma; Zazu, Alan; Dellera, Christian; Insaurralde, Carolina S; Alejandro, Risso V; Daldin, Julio; Vinzio, Mauricio; Fernandez, Ruben O; Cardonnet, Luis P; Bettini, Lisandro R; Bisso, Mariano Carboni; Osman, Emilio M; Setten, Mariano G; Lovazzano, Pablo; Alvarez, Javier; Villar, Veronica; Milstein, Cesar; Pozo, Norberto C; Grubissich, Nicolas; Plotnikow, Gustavo A; Vasquez, Daniela N; Ilutovich, Santiago; Tiribelli, Norberto; Chena, Ariel; Pellegrini, Carlos A; Saenz, María G; Estenssoro, Elisa; Brizuela, Matias; Gianinetto, Hernan; Gomez, Pablo E; Cerrato, Valeria I; Bezzi, Marco G; Borello, Silvina A; Loiacono, Flavia A; Fernandez, Adriana M; Knowles, Serena; Reynolds, Claire; Inskip, Deborah M; Miller, Jennene J; Kong, Jing; Whitehead, Christina; Bihari, Shailesh; Seven, Aylin; Krstevski, Amanda; Rodgers, Helen J; Millar, Rebecca T; Mckenna, Toni E; Bailey, Irene M; Hanlon, Gabrielle C; Aneman, Anders; Lynch, Joan M; Azad, Raman; Neal, John; Woods, Paul W; Roberts, Brigit L; Kol, Mark R; Wong, Helen S; Riss, Katharina C; Staudinger, Thomas; Wittebole, Xavier; Berghe, Caroline; Bulpa, Pierre A; Dive, Alain M; Verstraete, Rik; Lebbinck, Herve; Depuydt, Pieter; Vermassen, Joris; Meersseman, Philippe; Ceunen, Helga; Rosa, Jonas I; Beraldo, Daniel O; Piras, Claudio; Ampinelli, Adenilton M R; Nassar Jr, Antonio P; Mataloun, Sergio; Moock, Marcelo; Thompson, Marlus M; Gonçalves, Claudio H; Antônio, Ana Carolina P; Ascoli, Aline; Biondi, Rodrigo S; Fontenele, Danielle C; Nobrega, Danielle; Sales, Vanessa M; Shindhe, Suresh; Ismail, Dk Maizatul Aiman B Pg Hj; Laffey, John; Beloncle, Francois; Davies, Kyle G; Cirone, Rob; Manoharan, Venika; Ismail, Mehvish; Goligher, Ewan C; Jassal, Mandeep; Nishikawa, Erin; Javeed, Areej; Curley, Gerard; Rittayamai, Nuttapol; Parotto, Matteo; Ferguson, Niall D; Mehta, Sangeeta; Knoll, Jenny; Pronovost, Antoine; Canestrini, Sergio; Bruhn, Alejandro R; Garcia, Patricio H; Aliaga, Felipe A; Farías, Pamela A; Yumha, Jacob S; Ortiz, Claudia A; Salas, Javier E; Saez, Alejandro A; Vega, Luis D; Labarca, Eduardo F; Martinez, Felipe T; Carreño, Nicolás G; Lora, Pilar; Liu, Haitao; Qiu, Haibo; Liu, Ling; Tang, Rui; Luo, Xiaoming; An, Youzhong; Zhao, Huiying; Gao, Yan; Zhai, Zhe; Ye, Zheng L; Wang, Wei; Li, Wenwen; Li, Qingdong; Zheng, Ruiqiang; Yu, Wenkui; Shen, Juanhong; Li, Xinyu; Yu, Tao; Lu, Weihua; Wu, Ya Q; Huang, Xiao B; He, Zhenyang; Lu, Yuanhua; Han, Hui; Zhang, Fan; Sun, Renhua; Wang, Hua X; Qin, Shu H; Zhu, Bao H; Zhao, Jun; Liu, Jian; Li, Bin; Liu, Jing L; Zhou, Fa C; Li, Qiong J; Zhang, Xing Y; Li-Xin, Zhou; Xin-Hua, Qiang; Jiang, Liangyan; Gao, Yuan N; Zhao, Xian Y; Li, Yuan Y; Li, Xiao L; Wang, Chunting; Yao, Qingchun; Yu, Rongguo; Chen, Kai; Shao, Huanzhang; Qin, Bingyu; Huang, Qing Q; Zhu, Wei H; Hang, Ai Y; Hua, Ma X; Li, Yimin; Xu, Yonghao; Di, Yu D; Ling, Long L; Qin, Tie H; Wang, Shou H; Qin, Junping; Han, Yi; Zhou, Suming; Vargas, Monica P; Silesky Jimenez, Juan I; González Rojas, Manuel A; Solis-Quesada, Jaime E; Ramirez-Alfaro, Christian M; Máca, Jan; Sklienka, Peter; Gjedsted, Jakob; Christiansen, Aage; Nielsen, Jonas; Villamagua, Boris G; Llano, Miguel; Burtin, Philippe; Buzancais, Gautier; Beuret, Pascal; Pelletier, Nicolas; Mortaza, Satar; Mercat, Alain; Chelly, Jonathan; Jochmans, Sébastien; Terzi, Nicolas; Daubin, Cédric; Carteaux, Guillaume; de Prost, Nicolas; Chiche, Jean-Daniel; Daviaud, Fabrice; Pham, Tai; Fartoukh, Muriel; Barberet, Guillaume; Biehler, Jerome; Dellamonica, Jean; Doyen, Denis; Arnal, Jean-Michel; Briquet, Anais; Hraiech, Sami; Papazian, Laurent; Follin, Arnaud; Roux, Damien; Messika, Jonathan; Kalaitzis, Evangelos; Dangers, Laurence; Combes, Alain; Au, Siu-Ming; Béduneau, Gaetan; Carpentier, Dorothée; Zogheib, Elie H; Dupont, Herve; Ricome, Sylvie; Santoli, Francesco L; Besset, Sebastien L; Michel, Philippe; Gelée, Bruno; Danin, Pierre-Eric; Goubaux, Bernard; Crova, Philippe J; Phan, Nga T; Berkelmans, Frantz; Badie, Julio C; Tapponnier, Romain; Gally, Josette; Khebbeb, Samy; Herbrecht, Jean-Etienne; Schneider, Francis; Declercq, Pierre-Louis M; Rigaud, Jean-Philippe; Duranteau, Jacques; Harrois, Anatole; Chabanne, Russell; Marin, Julien; Bigot, Charlene; Thibault, Sandrine; Ghazi, Mohammed; Boukhazna, Messabi; Ould Zein, Salem; Richecoeur, Jack R; Combaux, Daniele M; Grelon, Fabien; Le Moal, Charlene; Sauvadet, Elise P; Robine, Adrien; Lemiale, Virginie; Reuter, Danielle; Dres, Martin; Demoule, Alexandre; Goldgran-Toledano, Dany; Baboi, Loredana; Guérin, Claude; Lohner, Ralph; Kraßler, Jens; Schäfer, Susanne; Zacharowski, Kai D; Meybohm, Patrick; Reske, Andreas W; Simon, Philipp; Hopf, Hans-Bernd F; Schuetz, Michael; Baltus, Thomas; Papanikolaou, Metaxia N; Papavasilopoulou, Theonymfi G; Zacharas, Giannis A; Ourailogloy, Vasilis; Mouloudi, Eleni K; Massa, Eleni V; Nagy, Eva O; Stamou, Electra E; Kiourtzieva, Ellada V; Oikonomou, Marina A; Avila, Luis E; Cortez, Cesar A; Citalán, Johanna E; Jog, Sameer A; Sable, Safal D; Shah, Bhagyesh; Gurjar, Mohan; Baronia, Arvind K; Memon, Mohammedfaruk; Muthuchellappan, Radhakrishnan; Ramesh, Venkatapura J; Shenoy, Anitha; Unnikrishnan, Ramesh; Dixit, Subhal B; Rhayakar, Rachana V; Ramakrishnan, Nagarajan; Bhardwaj, Vallish K; Mahto, Heera L; Sagar, Sudha V; Palaniswamy, Vijayanand; Ganesan, Deeban; Mohammadreza Hashemian, Seyed; Jamaati, Hamidreza; Heidari, Farshad; Meaney, Edel A; Nichol, Alistair; Knapman, Karl M; O'Croinin, Donall; Dunne, Eimhin S; Breen, Dorothy M; Clarkson, Kevin P; Jaafar, Rola F; Dwyer, Rory; Amir, Fahd; Ajetunmobi, Olaitan O; O'Muircheartaigh, Aogan C; Black, Colin S; Treanor, Nuala; Collins, Daniel V; Altaf, Wahid; Zani, Gianluca; Fusari, Maurizio; Spadaro, Savino; Volta, Carlo A; Graziani, Romano; Brunettini, Barbara; Palmese, Salvatore; Formenti, Paolo; Umbrello, Michele; Lombardo, Andrea; Pecci, Elisabetta; Botteri, Marco; Savioli, Monica; Protti, Alessandro; Mattei, Alessia; Schiavoni, Lorenzo; Tinnirello, Andrea; Todeschini, Manuel; Giarratano, Antonino; Cortegiani, Andrea; Sher, Sara; Rossi, Anna; Antonelli, Massimo M; Montini, Luca M; Casalena, Paolo; Scafetti, Sergio; Panarello, Giovanna; Occhipinti, Giovanna; Patroniti, Nicolò; Pozzi, Matteo; Biscione, Roberto R; Poli, Michela M; Raimondi, Ferdinando; Albiero, Daniela; Crapelli, Giulia; Beck, Eduardo; Pota, Vincenzo; Schiavone, Vincenzo; Molin, Alexandre; Tarantino, Fabio; Monti, Giacomo; Frati, Elena; Mirabella, Lucia; Cinnella, Gilda; Fossali, Tommaso; Colombo, Riccardo; Terragni, Pierpaolo; Pattarino, Ilaria; Mojoli, Francesco; Braschi, Antonio; Borotto, Erika E; Cracchiolo, Andrea N; Palma, Daniela M; Raponi, Francesco; Foti, Giuseppe; Vascotto, Ettore R; Coppadoro, Andrea; Brazzi, Luca; Floris, Leda; Iotti, Giorgio A; Venti, Aaron; Yamaguchi, Osamu; Takagi, Shunsuke; Maeyama, Hiroki N; Watanabe, Eizo; Yamaji, Yoshihiro; Shimizu, Kazuyoshi; Shiozaki, Kyoko; Futami, Satoru; Ryosuke, Sekine; Saito, Koji; Kameyama, Yoshinobu; Ueno, Keiko; Izawa, Masayo; Okuda, Nao; Suzuki, Hiroyuki; Harasawa, Tomofumi; Nasu, Michitaka; Takada, Tadaaki; Ito, Fumihito; Nunomiya, Shin; Koyama, Kansuke; Abe, Toshikazu; Andoh, Kohkichi; Kusumoto, Kohei; Hirata, Akira; Takaba, Akihiro; Kimura, Hiroyasu; Matsumoto, Shuhei; Higashijima, Ushio; Honda, Hiroyuki; Aoki, Nobumasa; Imai, Hiroshi; Ogino, Yasuaki; Mizuguchi, Ichiko; Ichikado, Kazuya; Nitta, Kenichi; Mochizuki, Katsunori; Hashida, Tomoaki; Tanaka, Hiroyuki; Nakamura, Tomoyuki; Niimi, Daisuke; Ueda, Takeshi; Kashiwa, Yozo; Uchiyama, Akinori; Sabelnikovs, Olegs; Oss, Peteris; Haddad, Youssef; Liew, Kong Y; Ñamendys-Silva, Silvio A; Jarquin-Badiola, Yves D; Sanchez-Hurtado, Luis A; Gomez-Flores, Saira S; Marin, Maria C; Villagomez, Asisclo J; Lemus, Jordana S; Fierro, Jonathan M; Cervantes, Mavy Ramirez; Mejia, Francisco Javier Flores; Gonzalez, Daniel R; Dector, Dulce M; Estrella, Claudia R; Sanchez-Medina, Jorge R; Ramirez-Gutierrez, Alvaro; George, Fernando G; Aguirre, Janet S; Buensuseso, Juan A; Poblano, Manuel; Dendane, Tarek; Zeggwagh, Amine Ali; Balkhi, Hicham; Elkhayari, Mina; Samkaoui, Nacer; Ezzouine, Hanane; Benslama, Abdellatif; Amor, Mourad; Maazouzi, Wajdi; Cimic, Nedim; Beck, Oliver; Bruns, Monique M; Schouten, Jeroen A; Rinia, Myra; Raaijmakers, Monique; Heunks, Leo M; Van Wezel, Hellen M; Heines, Serge J; Buise, Marc P; Simonis, Fabienne D; Schultz, Marcus J; Goodson, Jennifer C; rowne, Troy S B; Navarra, Leanlove; Hunt, Anna; Hutchison, Robyn A; Bailey, Mathew B; Newby, Lynette; Mcarthur, Colin; Kalkoff, Michael; Mcleod, Alex; Casement, Jonathan; Hacking, Danielle J; Andersen, Finn H; Dolva, Merete S; Laake, Jon H; Barratt-Due, Andreas; Noremark, Kim Andre L; Søreide, Eldar; Sjøbø, Brit Å; Guttormsen, Anne B; Yoshido, Hector H Leon; Aguilar, Ronald Zumaran; Oscanoa, Fredy A Montes; Alisasis, Alain U; Robles, Joanne B; Pasanting-Lim, Rossini Abbie B; Tan, Beatriz C; Andruszkiewicz, Pawel; Jakubowska, Karina; Cox, Cristina M; Alvarez, António M; Oliveira, Bruno S; Montanha, Gustavo M; Barros, Nelson C; Pereira, Carlos S; Messias, António M; Monteiro, Jorge M; Araujo, Ana M; Catorze, Nuno T; Marum, Susan M; Bouw, Maria J; Gomes, Rui M; Brito, Vania A; Castro, Silvia; Estilita, Joana M; Barros, Filipa M; Serra, Isabel M; Martinho, Aurelia M; Tomescu, Dana R; Marcu, Alexandra; Bedreag, Ovidiu H; Papurica, Marius; Corneci, Dan E; Negoita, Silvius Ioan; Grigoriev, Evgeny; Gritsan, Alexey I; Gazenkampf, Andrey A; Almekhlafi, Ghaleb; Albarrak, Mohamad M; Mustafa, Ghanem M; Maghrabi, Khalid A; Salahuddin, Nawal; Aisa, Tharwat M; Al Jabbary, Ahmed S; Tabhan, Edgardo; Arabi, Yaseen M; Trinidad, Olivia A; Al Dorzi, Hasan M; Tabhan, Edgardo E; Bolon, Stefan; Smith, Oliver; Mancebo, Jordi; Aguirre-Bermeo, Hernan; Lopez-Delgado, Juan C; Esteve, Francisco; Rialp, Gemma; Forteza, Catalina; De Haro, Candelaria; Artigas, Antonio; Albaiceta, Guillermo M; De Cima-Iglesias, Sara; Seoane-Quiroga, Leticia; Ceniceros-Barros, Alexandra; Ruiz-Aguilar, Antonio L; Claraco-Vega, Luis M; Soler, Juan Alfonso; Lorente, Maria del Carmen; Hermosa, Cecilia; Gordo, Federico; Prieto-González, Miryam; López-Messa, Juan B; Perez, Manuel P; Pere, Cesar P; Allue, Raquel Montoiro; Roche-Campo, Ferran; Ibañez-Santacruz, Marcos; Temprano, Susana; Pintado, Maria C; De Pablo, Raul; Gómez, Pilar Ricart Aroa; Ruiz, Silvia Rodriguez; Moles, Silvia Iglesias; Jurado, Mª Teresa; Arizmendi, Alfons; Piacentini, Enrique A; Franco, Nieves; Honrubia, Teresa; Perez Cheng, Meisy; Perez Losada, Elena; Blanco, Javier; Yuste, Luis J; Carbayo-Gorriz, Cecilia; Cazorla-Barranquero, Francisca G; Alonso, Javier G; Alda, Rosa S; Algaba, Ángela; Navarro, Gonzalo; Cereijo, Enrique; Diaz-Rodriguez, Esther; Marcos, Diego Pastor; Montero, Laura Alvarez; Para, Luis Herrera; Sanchez, Roberto Jimenez; Blasco Navalpotro, Miguel Angel; Abad, Ricardo Diaz; Montiel González, Raquel; Toribio, Dácil Parrilla; Castro, Alejandro G; Artiga, Maria Jose D; Penuelas, Oscar; Roser, Tomas P; Olga, Moreno F; Curto, Elena Gallego; Sánchez, Rocío Manzano; Imma, Vallverdu P; Elisabet, Garcia M; Claverias, Laura; Magret, Monica; Pellicer, Ana M; Rodriguez, Lucia L; Sánchez-Ballesteros, Jesús; González-Salamanca, Ángela; Jimenez, Antonio G; Huerta, Francisco P; Diaz, Juan Carlos J Sotillo; Lopez, Esther Bermejo; Moya, David D Llinares; Alfonso, Alec A Tallet; Eugenio Luis, Palazon Sanchez; Cesar, Palazon Sanchez; Rafael, Sánchez I; Virgilio, Corcoles G; Recio, Noelia N; Adamsson, Richard O; Rylander, Christian C; Holzgraefe, Bernhard; Broman, Lars M; Wessbergh, Joanna; Persson, Linnea; Schiöler, Fredrik; Kedelv, Hans; Tibblin, Anna Oscarsson; Appelberg, Henrik; Hedlund, Lars; Helleberg, Johan; 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May, Martin M; Stewart, Richard; Trinder, T John; Hagan, Samantha J; Wise, Matt P; Cole, Jade M; MacFie, Caroline C; Dowling, Anna T; Hurtado, Javier; Hurtado, Javier; Nuñez, Edgardo; Pittini, Gustavo; Rodriguez, Ruben; Imperio, María C; Santos, Cristina; França, Ana G.; Ebeid, Alejandro; Deicas, Alberto; Serra, Carolina; Uppalapati, Aditya; Kamel, Ghassan; Banner-Goodspeed, Valerie M; Beitler, Jeremy R; Mukkera, Satyanarayana Reddy; Kulkarni, Shreedhar; Lee, Jarone; Mesar, Tomaz; Shinn Iii, John O; Gomaa, Dina; Tainter, Christopher; Mesar, Tomaz; Cowley, R Adams; Yeatts, Dale J; Warren, Jessica; Lanspa, Michael J; Miller, Russel R; Grissom, Colin K; Brown, Samuel M; Bauer, Philippe R; Gosselin, Ryan J; Kitch, Barrett T; Cohen, Jason E; Beegle, Scott H; Gueret, Renaud M; Tulaimat, Aiman; Choudry, Shazia; Stigler, William; Batra, Hitesh; Huff, Nidhi G; Lamb, Keith D; Oetting, Trevor W; Mohr, Nicholas M; Judy, Claine; Saito, Shigeki; Kheir, Fayez M; Schlichting, Adam B; Delsing, Angela; Elmasri, Mary; Crouch, Daniel R; Ismail, Dina; Blakeman, Thomas C; Dreyer, Kyle R; Gomaa, Dina; Baron, Rebecca M; Grijalba, Carolina Quintana; Hou, Peter C; Seethala, Raghu; Aisiku, Imo; Henderson, Galen; Frendl, Gyorgy; Hou, Sen-Kuang; Owens, Robert L; Schomer, Ashley; Bumbasirevic, Vesna; Jovanovic, Bojan; Surbatovic, Maja; Veljovic, Milic;
• Is Part Of: Lancet. Volume 10:Issue 4(2022)
• Page Start: 367
• Page End: 377
• Publication Date: 2022-04
• Subjects: Respiratory organs -- Diseases -- Periodicals; 616.2005
• DOI: 10.1016/S2213-2600(21)00461-6
• Languages: English
• ISSNs: 2213-2600

Abstract

Summary: Background: Two acute respiratory distress syndrome (ARDS) subphenotypes (hyperinflammatory and hypoinflammatory) with distinct clinical and biological features and differential treatment responses have been identified using latent class analysis (LCA) in seven individual cohorts. To facilitate bedside identification of subphenotypes, clinical classifier models using readily available clinical variables have been described in four randomised controlled trials. We aimed to assess the performance of these models in observational cohorts of ARDS. Methods: In this observational, multicohort, retrospective study, we validated two machine-learning clinical classifier models for assigning ARDS subphenotypes in two observational cohorts of patients with ARDS: Early Assessment of Renal and Lung Injury (EARLI; n=335) and Validating Acute Lung Injury Markers for Diagnosis (VALID; n=452), with LCA-derived subphenotypes as the gold standard. The primary model comprised only vital signs and laboratory variables, and the secondary model comprised all predictors in the primary model, with the addition of ventilatory variables and demographics. Model performance was assessed by calculating the area under the receiver operating characteristic curve (AUC) and calibration plots, and assigning subphenotypes using a probability cutoff value of 0·5 to determine sensitivity, specificity, and accuracy of the assignments. We also assessed the performance of the primary model in EARLI using data automatically extracted from an electronic health record (EHR; EHR-derived EARLI cohort). In Large Observational Study to Understand the Global Impact of Severe Acute Respiratory Failure (LUNG SAFE; n=2813), a multinational, observational ARDS cohort, we applied a custom classifier model (with fewer variables than the primary model) to determine the prognostic value of the subphenotypes and tested their interaction with the positive end-expiratory pressure (PEEP) strategy, with 90-day mortality as the dependent variable. Findings: The primary clinical classifier model had an area under receiver operating characteristic curve (AUC) of 0·92 (95% CI 0·90–0·95) in EARLI and 0·88 (0·84–0·91) in VALID. Performance of the primary model was similar when using exclusively EHR-derived predictors compared with manually curated predictors (AUC=0·88 [95% CI 0·81–0·94] vs 0·92 [0·88–0·97]). In LUNG SAFE, 90-day mortality was higher in patients assigned the hyperinflammatory subphenotype than in those with the hypoinflammatory phenotype (414 [57%] of 725 vs 694 [33%] of 2088; p<0·0001). There was a significant treatment interaction with PEEP strategy and ARDS subphenotype (p=0·041), with lower 90-day mortality in the high PEEP group of patients with the hyperinflammatory subphenotype (hyperinflammatory subphenotype: 169 [54%] of 313 patients in the high PEEP group vs 127 [62%] of 205 patients in the low PEEP group; hypoinflammatory subphenotype: 231 [34%] of 675 patients in the high PEEP group vs 233 [32%] of 734 patients in the low PEEP group). Interpretation: Classifier models using clinical variables alone can accurately assign ARDS subphenotypes in observational cohorts. Application of these models can provide valuable prognostic information and could inform management strategies for personalised treatment, including application of PEEP, once prospectively validated. Funding: US National Institutes of Health and European Society of Intensive Care Medicine.