The complete chloroplast genome of Rhus punjabensis var. sinica. Issue 1 (2nd January 2022)

• Record Type: Journal Article
• Authors: Pan, Yunjia; Feng, Jinglu; Lin, Yulin; Yao, Hui
• Is Part Of: Mitochondrial DNA. Volume 7:Issue 1(2022)
• Page Start: 243
• Page End: 244
• Publication Date: 2022-01-02
• Subjects: Rhus punjabensis var. sinica -- chloroplast -- genome sequence; Mitochondrial DNA -- Periodicals; 572.869
• DOI: 10.1080/23802359.2021.1925983
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: Rhus punjabensis var. sinica belongs to the family Anacardiaceae in the order Sapindales. In this study, we first reported the complete chloroplast genome sequence of R. punjabensis var. sinica . The cp genome was sequenced on Illumina Hiseq 2000 platform. The sequence was found to be 159, 617 bp in length with 37.9% GC contents, including a large single-copy region of 87, 694 bp, a small single-copy region of 18, 971 bp, and a pair of inverted repeats of 26, 476 bp. The chloroplast genome of R. punjabensis var. sinica contains 133 genes, including 86 protein-coding genes, 8 rRNA genes, and 2 pseudogenes identified by CPGAVAS2 and BLAST search, and 37 tRNA genes annotated by tRNAscan-SE. Maximum-likelihood (ML) phylogenetic analysis showed that R. punjabensis var. sinica was sister to Rhus potaninii .