Metrics to relate COVID-19 wastewater data to clinical testing dynamics. (1st April 2022)

• Record Type: Journal Article
• Authors: Xiao, Amy; Wu, Fuqing; Bushman, Mary; Zhang, Jianbo; Imakaev, Maxim; Chai, Peter R; Duvallet, Claire; Endo, Noriko; Erickson, Timothy B; Armas, Federica; Arnold, Brian; Chen, Hongjie; Chandra, Franciscus; Ghaeli, Newsha; Gu, Xiaoqiong; Hanage, William P; Lee, Wei Lin; Matus, Mariana; McElroy, Kyle A; Moniz, Katya; Rhode, Steven F; Thompson, Janelle; Alm, Eric J
• Is Part Of: Water research. Volume 212(2022)
• Publication Date: 2022-04-01
• Subjects: Wastewater surveillance -- Wastewater-based epidemiology -- SARS-CoV-2 -- Temporal dynamics; Water -- Pollution -- Research -- Periodicals; 363.7394
• DOI: 10.1016/j.watres.2022.118070
• Languages: English
• ISSNs: 0043-1354

Abstract

Highlights: We introduce three metrics to relate SARS-CoV-2 wastewater data to clinical case data. These metrics can help evaluate public health responses such as testing capacity. Wastewater copy numbers preceded new cases in the first wave of COVID-19 in MA, USA. Wastewater data was not a leading indicator in the second wave. The role of wastewater surveillance changes as clinical testing capacity increases. Abstract: Wastewater surveillance has emerged as a useful tool in the public health response to the COVID-19 pandemic. While wastewater surveillance has been applied at various scales to monitor population-level COVID-19 dynamics, there is a need for quantitative metrics to interpret wastewater data in the context of public health trends. 24-hour composite wastewater samples were collected from March 2020 through May 2021 from a Massachusetts wastewater treatment plant and SARS-CoV-2 RNA concentrations were measured using RT-qPCR. The relationship between wastewater copy numbers of SARS-CoV-2 gene fragments and COVID-19 clinical cases and deaths varies over time. We demonstrate the utility of three new metrics to monitor changes in COVID-19 epidemiology: (1) the ratio between wastewater copy numbers of SARS-CoV-2 gene fragments and clinical cases (WC ratio), (2) the time lag between wastewater and clinical reporting, and (3) a transfer function between the wastewater and clinical case curves. The WC ratio increases after key events, providing insight into the balance between disease spread and public health response. Time lag and transfer function analysis showed that wastewater data preceded clinically reported cases in the first wave of the pandemic but did not serve as a leading indicator in the second wave, likely due to increased testing capacity, which allows for more timely case detection and reporting. These three metrics could help further integrate wastewater surveillance into the public health response to the COVID-19 pandemic and future pandemics. Graphical abstract: Image, graphical abstract