An algorithm to quantify correlated collective cell migration behavior. (February 2013)
- Record Type:
- Journal Article
- Title:
- An algorithm to quantify correlated collective cell migration behavior. (February 2013)
- Main Title:
- An algorithm to quantify correlated collective cell migration behavior
- Authors:
- Slater, Benjamin
Londono, Camila
McGuigan, Alison P. - Abstract:
- Collective cell migration is an important process that determines cell reorganization in a number of biological events such as development and regeneration. Random cell reorganization within a confluent monolayer is a popular in vitro model system for understanding the mechanisms that underlie coordination between neighboring cells during collective motion. Here we describe a simple automated C ++ algorithm to quantify the width of streams of correlated cells moving within monolayers. Our method is efficient and allows analysis of thousands of cells in under a minute; analysis of large data sets is therefore possible without limitations due to computational time, a common analysis bottleneck. Furthermore, our method allows characterization of the variability in correlated stream widths among a cell monolayer. We quantify stream width in the human retinal epithelial cell line ARPE-19 and the fibroblast cell line BJ, and find that for both cell types, stream widths within the monolayer vary in size significantly with a peak width of 40 µm, corresponding to a width of approximately two cells. Our algorithm provides a novel analytical tool to quantify and analyze correlated cell movement in confluent sheets at a population level and to assess factors that impact coordinated collective cell migration.
- Is Part Of:
- Biotechniques. Volume 54:Number 2(2013)
- Journal:
- Biotechniques
- Issue:
- Volume 54:Number 2(2013)
- Issue Display:
- Volume 54, Issue 2 (2013)
- Year:
- 2013
- Volume:
- 54
- Issue:
- 2
- Issue Sort Value:
- 2013-0054-0002-0000
- Page Start:
- 87
- Page End:
- 92
- Publication Date:
- 2013-02
- Subjects:
- collective cell migration -- correlation algorithm -- cellular monolayer -- wound healing
Biology, Experimental -- Periodicals
Molecular biology -- Periodicals
Medical technology -- Periodicals
Biology, Experimental
Medical technology
Molecular biology
Clinical Laboratory Techniques -- Periodicals
Research -- Periodicals
Medical Laboratory Science -- Periodicals
Periodicals
Electronic journals
570 - Journal URLs:
- http://www.biotechniques.com/ ↗
https://www.future-science.com/journal/btn ↗
http://www.futuremedicine.com/ ↗ - DOI:
- 10.2144/000113990 ↗
- Languages:
- English
- ISSNs:
- 0736-6205
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
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- 20608.xml