Microscopic segmentation and classification of COVID‐19 infection with ensemble convolutional neural network. Issue 1 (26th August 2021)

• Record Type: Journal Article
• Authors: Amin, Javeria; Anjum, Muhammad Almas; Sharif, Muhammad; Rehman, Amjad; Saba, Tanzila; Zahra, Rida
• Is Part Of: Microscopy research and technique. Volume 85:Issue 1(2022)
• Page Start: 385
• Page End: 397
• Publication Date: 2021-08-26
• Subjects: Deeplabv3 -- denoise convolutional neural network (DnCNN) -- healthcare -- public health -- ResNet‐18 -- stack sparse autoencoder deep learning model (SSAE); Electron microscopy -- Technique -- Periodicals; Microscopy -- Periodicals; Microscopy -- Technique -- Periodicals; 502.825
• DOI: 10.1002/jemt.23913
• Languages: English
• ISSNs: 1059-910X

Abstract

Abstract: The detection of biological RNA from sputum has a comparatively poor positive rate in the initial/early stages of discovering COVID‐19, as per the World Health Organization. It has a different morphological structure as compared to healthy images, manifested by computer tomography (CT). COVID‐19 diagnosis at an early stage can aid in the timely cure of patients, lowering the mortality rate. In this reported research, three‐phase model is proposed for COVID‐19 detection. In Phase I, noise is removed from CT images using a denoise convolutional neural network (DnCNN). In the Phase II, the actual lesion region is segmented from the enhanced CT images by using deeplabv3 and ResNet‐18. In Phase III, segmented images are passed to the stack sparse autoencoder (SSAE) deep learning model having two stack auto‐encoders (SAE) with the selected hidden layers. The designed SSAE model is based on both SAE and softmax layers for COVID19 classification. The proposed method is evaluated on actual patient data of Pakistan Ordinance Factories and other public benchmark data sets with different scanners/mediums. The proposed method achieved global segmentation accuracy of 0.96 and 0.97 for classification. Abstract : Denoise convolutional neural network regression model used for noise removal to enhance images quality. Model deeplabv3 is used as a backbone of the ResNet‐18 model to segment infected lungs region. Segmented images are further supplied to stack sparse autoencoder model for COVID‐19 classification.