CORAL: Monte Carlo based global QSAR modelling of Bruton tyrosine kinase inhibitors using hybrid descriptors. Issue 12 (2nd December 2021)

• Record Type: Journal Article
• Authors: Ahmadi, S.; Lotfi, S.; Afshari, S.; Kumar, P.; Ghasemi, E.
• Is Part Of: SAR and QSAR in environmental research. Volume 32:Issue 12(2021)
• Page Start: 1013
• Page End: 1031
• Publication Date: 2021-12-02
• Subjects: Global QSAR -- BTK inhibitors -- CORAL software -- SMILES -- Monte Carlo method; Structure-activity relationships (Biochemistry) -- Periodicals; QSAR (Biochemistry) -- Periodicals; 572.4
• DOI: 10.1080/1062936X.2021.2003429
• Languages: English
• ISSNs: 1062-936X

Abstract

ABSTRACT: Global QSAR modelling was performed to predict the pIC50 values of 233 diverse heterocyclic compounds as BTK inhibitors with the Monte Carlo algorithm of CORAL software using the DCW hybrid descriptors extracted from SMILES notations of molecules. The dataset of 233 BTK inhibitors was randomly split into training, invisible training, calibration and validation sets. The index of ideality of correlation was also applied to build and judge the predictability of the QSAR models. Eight global QSAR models based on the hybrid optimal descriptor using two target functions, i.e. TF1 (WIIC = 0) and TF2 (WIIC = 0.2) have been constructed. The statistical parameters of QSAR models computed by TF2 are more reliable and robust and were used to predict the pIC50 values. The model constructed for split 4 via TF2 is regarded as the best model and the numerical values of r 2 Train, r 2 Valid, Q 2 Train and Q 2 Valid are equal to 0.7981, 0.7429, 0.7898 and 0.6784, respectively. By internal and external validation techniques, the predictability and reliability of the designed models have been assessed. The structural attributes responsible for the increase and decrease of pIC50 of BTK inhibitors were also identified.