High-throughput Genetically Modified Animal Experiments Achieved by Next-generation Mammalian Genetics. Issue 2 (April 2022)

• Record Type: Journal Article
• Authors: Minami, Yoichi; Yuan, Yufei; Ueda, Hiroki R.
• Is Part Of: Journal of biological rhythms. Volume 37:Issue 2(2022)
• Page Start: 135
• Page End: 151
• Publication Date: 2022-04
• Subjects: triple CRISPR -- ES mouse -- next-generation genetics -- circadian rhythms -- high-throughput assay; Biological rhythms -- Periodicals; Circadian rhythms -- Periodicals; 571.77
• DOI: 10.1177/07487304221075002
• Languages: English
• ISSNs: 0748-7304

Abstract

Animal models are essential tools for modern scientists to conduct biological experiments and investigate their hypotheses in vivo. However, for the past decade, raising the throughput of such animal experiments has been a great challenge. Conventionally, in vivo high-throughput assay was achieved through large-scale mutagen-driven forward genetic screening, which took years to find causal genes. In contrast, reverse genetics accelerated the causal gene identification process, but its throughput was also limited by 2 barriers, that is, the genome modification step and the time-consuming crossing step. Defined as genetics without crossing, next-generation genetics is able to produce gene-modified animals that can be analyzed at the founder generation (F0). This method is or can be accomplished through recent technological advances in gene editing and virus-based efficient gene modifications. Notably, next-generation genetics has accelerated the process of cross-species studies, and it will be a useful technique during animal experiments as it can provide genetic perturbation at an individual level without crossing. In this review, we begin by introducing the history of animal-based high-throughput analysis, with a specific focus on chronobiology. We then describe ways that gene modification efficiency during animal experiments was enhanced and why crossing remained a barrier to reaching higher efficiency. Moreover, we mention the Triple CRISPR as a critical technique for achieving next-generation genetics. Finally, we discuss the potential applications and limitations of next-generation mammalian genetics.