LsrB, the hub of ABC transporters involved in the membrane damage mechanisms of heavy ion irradiation in Escherichia coli. (2nd December 2021)

• Record Type: Journal Article
• Authors: Li, Xin; Chen, Lei; Zhou, Haitao; Gu, Shaobin; Wu, Ying; Wang, Bing; Zhang, Miaomiao; Ding, Nan; Sun, Jiaju; Pang, Xinyue; Lu, Dong
• Is Part Of: International journal of radiation biology. Volume 97:Number 12(2021)
• Page Start: 1731
• Page End: 1740
• Publication Date: 2021-12-02
• Subjects: ABC transporter -- biofilm -- heavy ion -- protein–protein interaction (PPI) network -- quorum sensing (QS) -- transcriptomic; Radiation -- Physiological effect -- Periodicals; Radiobiology -- Periodicals; 571.45
• DOI: 10.1080/09553002.2021.1987565
• Languages: English
• ISSNs: 0955-3002

Abstract

Abstract: Background: Ionizing radiation, especially heavy ion (HI) beams, has been widely used in biology and medicine. However, the mechanism of membrane damage by such radiation remains primarily uncharacterized. Purpose: Transcriptomic profiles of Escherichia coli ( E. coli ) treated with HI illustrated the response mechanisms of the membrane, mainly ABC transporters, related genes regulated by antibiotics treatment through enrichment analyses of GO and KEGG. The networks of protein–protein interactions indicated that LsrB was the crucial one among the ABC transporters specially regulated by HI through the calculation of plugins MCODE and cytoHubba of Cytoscape. Finally, the expression pattern, GO/KEGG enrichment terms, and the interaction between nine LuxS/AI-2 quorum sensing system members were investigated. Conclusions: Above all, results suggested that HI might perform membrane damage through regulated material transport, inhibited LuxS/AI-2 system, finally impeded biofilm formation. This work provides further evidence for the role of ABC transporters, especially LsrB, in membrane damage of E. coli to HI. It will provide new strategies for improving the precise application of HI.