Association of CD40 with rheumatoid arthritis confirmed in a large UK case-control study. Issue 5 (11th May 2009)
- Record Type:
- Journal Article
- Title:
- Association of CD40 with rheumatoid arthritis confirmed in a large UK case-control study. Issue 5 (11th May 2009)
- Main Title:
- Association of CD40 with rheumatoid arthritis confirmed in a large UK case-control study
- Authors:
- Orozco, Gisela
Eyre, Steve
Hinks, Anne
Ke, Xiayi
Wilson, Anthony G
Bax, Deborah E
Morgan, Ann W
Emery, Paul
Steer, Sophia
Hocking, Lynne
Reid, David M
Wordsworth, Paul
Harrison, Pille
Thomson, Wendy
Barton, Anne
Worthington, Jane - Abstract:
- Abstract : Objective: A recent meta-analysis of published genome-wide association studies (GWAS) in populations of European descent reported novel associations of markers mapping to the CD40, CCL21 and CDK6 genes with rheumatoid arthritis (RA) susceptibility while a large-scale, case-control association study in a Japanese population identified association with multiple single nucleotide polymorphisms (SNPs) in the CD244 gene. The aim of the current study was to validate these potential RA susceptibility markers in a UK population. Methods: A total of 4 SNPs (rs4810485 in CD40, rs2812378 in CCL21, rs42041 in CDK6 and rs6682654 in CD244 ) were genotyped in a UK cohort comprising 3962 UK patients with RA and 3531 healthy controls using the Sequenom iPlex platform. Genotype counts in patients and controls were analysed with the χ 2 test using Stata. Results: Association to the CD40 gene was robustly replicated (p=2×10 −4, OR 0.86, 95% CI 0.79 to 0.93) and modest evidence was found for association with the CCL21 locus (p=0.04, OR 1.08, 95% CI 1.01 to 1.16). However, there was no evidence for association of rs42041 ( CDK6 ) and rs6682654 ( CD244 ) with RA susceptibility in this UK population. Following a meta-analysis including the original data, association to CD40 was confirmed (p=7.8×10 −8, OR 0.87 (95% CI 0.83 to 0.92). Conclusion: In this large UK cohort, strong association of the CD40 gene with susceptibility to RA was found, and weaker evidence for association with RA inAbstract : Objective: A recent meta-analysis of published genome-wide association studies (GWAS) in populations of European descent reported novel associations of markers mapping to the CD40, CCL21 and CDK6 genes with rheumatoid arthritis (RA) susceptibility while a large-scale, case-control association study in a Japanese population identified association with multiple single nucleotide polymorphisms (SNPs) in the CD244 gene. The aim of the current study was to validate these potential RA susceptibility markers in a UK population. Methods: A total of 4 SNPs (rs4810485 in CD40, rs2812378 in CCL21, rs42041 in CDK6 and rs6682654 in CD244 ) were genotyped in a UK cohort comprising 3962 UK patients with RA and 3531 healthy controls using the Sequenom iPlex platform. Genotype counts in patients and controls were analysed with the χ 2 test using Stata. Results: Association to the CD40 gene was robustly replicated (p=2×10 −4, OR 0.86, 95% CI 0.79 to 0.93) and modest evidence was found for association with the CCL21 locus (p=0.04, OR 1.08, 95% CI 1.01 to 1.16). However, there was no evidence for association of rs42041 ( CDK6 ) and rs6682654 ( CD244 ) with RA susceptibility in this UK population. Following a meta-analysis including the original data, association to CD40 was confirmed (p=7.8×10 −8, OR 0.87 (95% CI 0.83 to 0.92). Conclusion: In this large UK cohort, strong association of the CD40 gene with susceptibility to RA was found, and weaker evidence for association with RA in the CCL21 locus. … (more)
- Is Part Of:
- Annals of the rheumatic diseases. Volume 69:Issue 5(2010)
- Journal:
- Annals of the rheumatic diseases
- Issue:
- Volume 69:Issue 5(2010)
- Issue Display:
- Volume 69, Issue 5 (2010)
- Year:
- 2010
- Volume:
- 69
- Issue:
- 5
- Issue Sort Value:
- 2010-0069-0005-0000
- Page Start:
- 813
- Page End:
- 816
- Publication Date:
- 2009-05-11
- Subjects:
- Rheumatism -- Periodicals
616.723005 - Journal URLs:
- http://ard.bmjjournals.com/ ↗
http://www.pubmedcentral.nih.gov/tocrender.fcgi?journal=149&action=archive ↗
http://www.bmj.com/archive ↗
http://gateway.ovid.com/server3/ovidweb.cgi?T=JS&MODE=ovid&D=ovft&PAGE=titles&SEARCH=annals+of+the+rheumatic+diseases.tj&NEWS=N ↗ - DOI:
- 10.1136/ard.2009.109579 ↗
- Languages:
- English
- ISSNs:
- 0003-4967
- Deposit Type:
- Legaldeposit
- View Content:
- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
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- 19237.xml