PO 8441 Experimental comparison of sensitivity of LAMP and real-time PCR. (24th April 2019)
- Record Type:
- Journal Article
- Title:
- PO 8441 Experimental comparison of sensitivity of LAMP and real-time PCR. (24th April 2019)
- Main Title:
- PO 8441 Experimental comparison of sensitivity of LAMP and real-time PCR
- Authors:
- Kaboré, Jacques
Ilboudo, Hamidou
Compaoré, Charlie FA
Camara, Oumou
Bamba, Mohamed
Sakandé, Hassane
Camara, Mamadou
Bucheton, Bruno
Kaba, Dramane
Jamonneau, Vincent
Deborggraeve, Stijn
Lejon, Veerle - Abstract:
- Abstract : Background: Human African trypanosomiasis, or sleeping sickness, remains a serious problem in tropical Africa. Timely diagnosis of this disease requires systematic population screening, particularly for Trypanosoma brucei gambiense, which has a long asymptomatic period. The lack of sensitivity and specificity of conventional diagnostic tests has led in recent years to the use of molecular tools. Amplification of parasite-specific DNA sequences significantly improved diagnosis of infection. However, these molecular tools still have some limitations especially in the case of low parasitaemia. Furthermore, research is still needed to make molecular detection a real control tool for the fight against sleeping sickness. The purpose of this study is to determine the threshold of sensitivity of real-time PCR using the 18S and TgsGp primers and of the LAMP technique, applied in the DiTECT-HAT project as molecular reference tests. Methods: We used serial dilutions containing 0, 1, 10, 100, 10 3, 10 4, 10 5, 10 6 parasites per ml of blood. Samples were extracted, and DNA was amplified. Results: The analytical sensitivity of the 18S real-time PCR with the Taqman probe of the filter paper samples is 100 parasites/ml and that of the TgsGp real-time PCR with the Taqman probe of filter paper samples is 10 4 parasites/ml. For Lamp technique, the analytical sensitivity is 10 3 parasites/ml. Conclusion: This study shows that a 'negative PCR' would not mean 'no parasite'. ItAbstract : Background: Human African trypanosomiasis, or sleeping sickness, remains a serious problem in tropical Africa. Timely diagnosis of this disease requires systematic population screening, particularly for Trypanosoma brucei gambiense, which has a long asymptomatic period. The lack of sensitivity and specificity of conventional diagnostic tests has led in recent years to the use of molecular tools. Amplification of parasite-specific DNA sequences significantly improved diagnosis of infection. However, these molecular tools still have some limitations especially in the case of low parasitaemia. Furthermore, research is still needed to make molecular detection a real control tool for the fight against sleeping sickness. The purpose of this study is to determine the threshold of sensitivity of real-time PCR using the 18S and TgsGp primers and of the LAMP technique, applied in the DiTECT-HAT project as molecular reference tests. Methods: We used serial dilutions containing 0, 1, 10, 100, 10 3, 10 4, 10 5, 10 6 parasites per ml of blood. Samples were extracted, and DNA was amplified. Results: The analytical sensitivity of the 18S real-time PCR with the Taqman probe of the filter paper samples is 100 parasites/ml and that of the TgsGp real-time PCR with the Taqman probe of filter paper samples is 10 4 parasites/ml. For Lamp technique, the analytical sensitivity is 10 3 parasites/ml. Conclusion: This study shows that a 'negative PCR' would not mean 'no parasite'. It suggests that DNA detection techniques should still be improved. … (more)
- Is Part Of:
- BMJ global health. Volume 4(2019)Supplement 3
- Journal:
- BMJ global health
- Issue:
- Volume 4(2019)Supplement 3
- Issue Display:
- Volume 4, Issue 3 (2019)
- Year:
- 2019
- Volume:
- 4
- Issue:
- 3
- Issue Sort Value:
- 2019-0004-0003-0000
- Page Start:
- A37
- Page End:
- A38
- Publication Date:
- 2019-04-24
- Subjects:
- World health -- Periodicals
362.105 - Journal URLs:
- http://www.bmj.com/archive ↗
http://gh.bmj.com/ ↗ - DOI:
- 10.1136/bmjgh-2019-EDC.98 ↗
- Languages:
- English
- ISSNs:
- 2059-7908
- Deposit Type:
- Legaldeposit
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- Available online (eLD content is only available in our Reading Rooms) ↗
- Physical Locations:
- British Library DSC - BLDSS-3PM
British Library HMNTS - ELD Digital store - Ingest File:
- 19232.xml