Epidemiology and clinical features of rotavirus, adenovirus, and astrovirus infections and coinfections in children with acute gastroenteritis prior to rotavirus vaccine introduction in Meerut, North India. Issue 8 (18th December 2019)

• Record Type: Journal Article
• Authors: Akdag, Ali Ilter; Gupta, Shipra; Khan, Naushad; Upadhayay, Amit; Ray, Pratima
• Is Part Of: Journal of medical virology. Volume 92:Issue 8(2020)
• Page Start: 1102
• Page End: 1109
• Publication Date: 2019-12-18
• Subjects: adenovirus -- astrovirus -- diarrhea -- hospitalized children -- rotavirus -- viral gastroenteritis; Virology -- Periodicals; 616
• DOI: 10.1002/jmv.25645
• Languages: English
• ISSNs: 0146-6615

Abstract

Abstract: There are limited reports on the etiology of multiple enteric viruses causing acute gastroenteritis (AGE) in North India. In the present study we have determined the prevalence of three enteric viruses, namely rotavirus, astrovirus (AstV) and adenovirus (AdV) in a total of 312 diarrheic children (<5 years) hospitalized at Lala Lajpat Rai Memorial Medical College, Meerut, Uttar Pradesh from August 2014 to July 2016; and results were compared with data from Delhi. The fecal samples were individually screened for group A rotavirus (RVA), AdV, and AstV using enzyme immunoassay kits. At least one viral agent was detected in 29.2% of 312 fecal specimens. RNA of rotavirus antigen‐positive samples was extracted by TRIzol method. Rotavirus G/P genotyping was performed using seminested multiplex reverse transcriptase‐polymerase chain reaction. RVA was the most predominant virus (18.3%) followed by AstV (12.5%), and AdV (9.9%). Coinfections were detected in 10.6% cases and the most common coinfection in diarrheic children was RVA combined with AstV (36.4%). Overall, the enteric viruses were found most prevalent in the 6 to 11 months age group ( P = .01). Increased duration of vomiting (≥3 days) was significantly ( P = .04) associated with AdV infection (61.3%) as compared with AstV (30.76%) and rotavirus (26.31%). G1P[8] was detected throughout as the most prevalent rotavirus strain (10.5%). Unusual RV strains like G2P[6] and G2P[8] were also detected. Of note G3, G4, and G12 rotavirus were detected for the first time in Meerut. This is the first report that demonstrated the important contribution of multiple enteric viruses causing AGE in young children in this part of Uttar Pradesh (Meerut). Highlights: Prevalence of three enteric viruses, namely rotavirus, astrovirus (AstV) and adenovirus (AdV) in a total of 312 children (<5 years) hospitalized due to diarrhea in Meerut, Uttar Pradesh was determined during 2014‐2016. RVA was the most predominant virus (18.3%) followed by AstV (12.5%), and AdV (9.9%). Increased duration of vomiting (≥3 days) was significantly associated with AdV infection (61.3%) as compared with AstV (30.76%) and RVA (26.31%). Genotypes G3, G4, and G12 rotavirus were detected for the first time in Meerut. Rotavirus strain, G1P[8] was detected throughout as the most predominant strain.