The complete mitochondrial genome of the killifish Orestias sp. (Cyprinodontiformes, Cyprinodontidae) from the high Andean range. (3rd July 2016)

• Record Type: Journal Article
• Authors: Quezada-Romegialli, Claudio; Guerrero, Claudia Jimena; Véliz, David; Vila, Irma
• Is Part Of: Mitochondrial DNA. Volume 27:Number 4(2016)
• Page Start: 2840
• Page End: 2841
• Publication Date: 2016-07-03
• Subjects: Altiplano -- freshwater fish -- NGS -- next-generation sequencing
• DOI: 10.3109/19401736.2015.1053119
• Languages: English
• ISSNs: 2380-2359

Abstract

Abstract: The killifish genus Orestias is endemic to freshwater ecosystems in the High Andes of Peru, Bolivia and Chile. Phylogenetic and phylogeographic studies with partial mitochondrial genes have failed to resolve relationship among species, needing more comprehensive approaches. In this study, we described the complete mitochondrial genome of Orestias sp. from Lirima, northern Chile, with the aim to provide useful data for phylogenetic purposes and species delimitation. The mitochondrial genome was assembled with 2.6 million of reads obtained through an Ion Torrent (chip 318) sequencer. The circular sequence of 16, 617 bp showed the following nucleotide composition: A, 26.7%, C, 27.1%, G, 17.0%, and T, 29.2%. Gene composition and structure were similar to other fish sequences available, and comprised 13 protein-coding genes, 12S and 16S rRNA, 22 tRNA genes, and a control region.