Genome-wide association study of clinically defined gout identifies multiple risk loci and its association with clinical subtypes. Issue 4 (2nd February 2015)
- Record Type:
- Journal Article
- Title:
- Genome-wide association study of clinically defined gout identifies multiple risk loci and its association with clinical subtypes. Issue 4 (2nd February 2015)
- Main Title:
- Genome-wide association study of clinically defined gout identifies multiple risk loci and its association with clinical subtypes
- Authors:
- Matsuo, Hirotaka
Yamamoto, Ken
Nakaoka, Hirofumi
Nakayama, Akiyoshi
Sakiyama, Masayuki
Chiba, Toshinori
Takahashi, Atsushi
Nakamura, Takahiro
Nakashima, Hiroshi
Takada, Yuzo
Danjoh, Inaho
Shimizu, Seiko
Abe, Junko
Kawamura, Yusuke
Terashige, Sho
Ogata, Hiraku
Tatsukawa, Seishiro
Yin, Guang
Okada, Rieko
Morita, Emi
Naito, Mariko
Tokumasu, Atsumi
Onoue, Hiroyuki
Iwaya, Keiichi
Ito, Toshimitsu
Takada, Tappei
Inoue, Katsuhisa
Kato, Yukio
Nakamura, Yukio
Sakurai, Yutaka
Suzuki, Hiroshi
Kanai, Yoshikatsu
Hosoya, Tatsuo
Hamajima, Nobuyuki
Inoue, Ituro
Kubo, Michiaki
Ichida, Kimiyoshi
Ooyama, Hiroshi
Shimizu, Toru
Shinomiya, Nariyoshi
… (more) - Abstract:
- Abstract : Objective: Gout, caused by hyperuricaemia, is a multifactorial disease. Although genome-wide association studies (GWASs) of gout have been reported, they included self-reported gout cases in which clinical information was insufficient. Therefore, the relationship between genetic variation and clinical subtypes of gout remains unclear. Here, we first performed a GWAS of clinically defined gout cases only. Methods: A GWAS was conducted with 945 patients with clinically defined gout and 1213 controls in a Japanese male population, followed by replication study of 1048 clinically defined cases and 1334 controls. Results: Five gout susceptibility loci were identified at the genome-wide significance level (p<5.0×10 −8 ), which contained well-known urate transporter genes ( ABCG2 and SLC2A9 ) and additional genes: rs1260326 (p=1.9×10 −12 ; OR=1.36) of GCKR (a gene for glucose and lipid metabolism), rs2188380 (p=1.6×10 −23 ; OR=1.75) of MYL2-CUX2 (genes associated with cholesterol and diabetes mellitus) and rs4073582 (p=6.4×10 −9 ; OR=1.66) of CNIH-2 (a gene for regulation of glutamate signalling). The latter two are identified as novel gout loci. Furthermore, among the identified single-nucleotide polymorphisms (SNPs), we demonstrated that the SNPs of ABCG2 and SLC2A9 were differentially associated with types of gout and clinical parameters underlying specific subtypes (renal underexcretion type and renal overload type). The effect of the risk allele of each SNP onAbstract : Objective: Gout, caused by hyperuricaemia, is a multifactorial disease. Although genome-wide association studies (GWASs) of gout have been reported, they included self-reported gout cases in which clinical information was insufficient. Therefore, the relationship between genetic variation and clinical subtypes of gout remains unclear. Here, we first performed a GWAS of clinically defined gout cases only. Methods: A GWAS was conducted with 945 patients with clinically defined gout and 1213 controls in a Japanese male population, followed by replication study of 1048 clinically defined cases and 1334 controls. Results: Five gout susceptibility loci were identified at the genome-wide significance level (p<5.0×10 −8 ), which contained well-known urate transporter genes ( ABCG2 and SLC2A9 ) and additional genes: rs1260326 (p=1.9×10 −12 ; OR=1.36) of GCKR (a gene for glucose and lipid metabolism), rs2188380 (p=1.6×10 −23 ; OR=1.75) of MYL2-CUX2 (genes associated with cholesterol and diabetes mellitus) and rs4073582 (p=6.4×10 −9 ; OR=1.66) of CNIH-2 (a gene for regulation of glutamate signalling). The latter two are identified as novel gout loci. Furthermore, among the identified single-nucleotide polymorphisms (SNPs), we demonstrated that the SNPs of ABCG2 and SLC2A9 were differentially associated with types of gout and clinical parameters underlying specific subtypes (renal underexcretion type and renal overload type). The effect of the risk allele of each SNP on clinical parameters showed significant linear relationships with the ratio of the case–control ORs for two distinct types of gout (r=0.96 [p=4.8×10 −4 ] for urate clearance and r=0.96 [p=5.0×10 −4 ] for urinary urate excretion). Conclusions: Our findings provide clues to better understand the pathogenesis of gout and will be useful for development of companion diagnostics. … (more)
- Is Part Of:
- Annals of the rheumatic diseases. Volume 75:Issue 4(2016)
- Journal:
- Annals of the rheumatic diseases
- Issue:
- Volume 75:Issue 4(2016)
- Issue Display:
- Volume 75, Issue 4 (2016)
- Year:
- 2016
- Volume:
- 75
- Issue:
- 4
- Issue Sort Value:
- 2016-0075-0004-0000
- Page Start:
- 652
- Page End:
- 659
- Publication Date:
- 2015-02-02
- Subjects:
- Gout -- Arthritis -- Gene Polymorphism
Rheumatism -- Periodicals
616.723005 - Journal URLs:
- http://ard.bmjjournals.com/ ↗
http://www.pubmedcentral.nih.gov/tocrender.fcgi?journal=149&action=archive ↗
http://www.bmj.com/archive ↗
http://gateway.ovid.com/server3/ovidweb.cgi?T=JS&MODE=ovid&D=ovft&PAGE=titles&SEARCH=annals+of+the+rheumatic+diseases.tj&NEWS=N ↗ - DOI:
- 10.1136/annrheumdis-2014-206191 ↗
- Languages:
- English
- ISSNs:
- 0003-4967
- Deposit Type:
- Legaldeposit
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- Available online (eLD content is only available in our Reading Rooms) ↗
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- British Library DSC - BLDSS-3PM
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