Ankylosing spondylitis is associated with the anthrax toxin receptor 2 gene (ANTXR2). Issue 11 (28th August 2014)
- Record Type:
- Journal Article
- Title:
- Ankylosing spondylitis is associated with the anthrax toxin receptor 2 gene (ANTXR2). Issue 11 (28th August 2014)
- Main Title:
- Ankylosing spondylitis is associated with the anthrax toxin receptor 2 gene (ANTXR2)
- Authors:
- Karaderi, T
Keidel, S M
Pointon, J J
Appleton, L H
Brown, M A
Evans, D M
Wordsworth, B P - Abstract:
- Abstract : Objectives: ANTXR2 variants have been associated with ankylosing spondylitis (AS) in two previous genome-wide association studies (GWAS) (p∼9×10 −8 ). However, a genome-wide significant association (p<5×10 −8 ) was not observed. We conducted a more comprehensive analysis of ANTXR2 in an independent UK sample to confirm and refine this association. Methods: A replication study was carried out with 2978 cases and 8365 controls. Then, these were combined with non-overlapping samples from the two previous GWAS in a meta-analysis. Human leukocyte antigen (HLA)-B27 stratification was also performed to test for ANTXR2 -HLA-B27 interaction. Results: Out of nine single nucleotide polymorphisms (SNP) in the study, five SNPs were nominally associated (p<0.05) with AS in the replication dataset. In the meta-analysis, eight SNPs showed evidence of association, the strongest being with rs12504282 (OR=0.88, p=6.7×10 −9 ). Seven of these SNPs showed evidence for association in the HLA-B27-positive subgroup, but none was associated with HLA-B27-negative AS. However, no statistically significant interaction was detected between HLA-B27 and ANTXR2 variants. Conclusions: ANTXR2 variants are clearly associated with AS. The top SNPs from two previous GWAS (rs4333130 and rs4389526) and this study (rs12504282) are in strong linkage disequilibrium (r 2 ≥0.76). All are located near a putative regulatory region. Further studies are required to clarify the role played by these ANTXR2Abstract : Objectives: ANTXR2 variants have been associated with ankylosing spondylitis (AS) in two previous genome-wide association studies (GWAS) (p∼9×10 −8 ). However, a genome-wide significant association (p<5×10 −8 ) was not observed. We conducted a more comprehensive analysis of ANTXR2 in an independent UK sample to confirm and refine this association. Methods: A replication study was carried out with 2978 cases and 8365 controls. Then, these were combined with non-overlapping samples from the two previous GWAS in a meta-analysis. Human leukocyte antigen (HLA)-B27 stratification was also performed to test for ANTXR2 -HLA-B27 interaction. Results: Out of nine single nucleotide polymorphisms (SNP) in the study, five SNPs were nominally associated (p<0.05) with AS in the replication dataset. In the meta-analysis, eight SNPs showed evidence of association, the strongest being with rs12504282 (OR=0.88, p=6.7×10 −9 ). Seven of these SNPs showed evidence for association in the HLA-B27-positive subgroup, but none was associated with HLA-B27-negative AS. However, no statistically significant interaction was detected between HLA-B27 and ANTXR2 variants. Conclusions: ANTXR2 variants are clearly associated with AS. The top SNPs from two previous GWAS (rs4333130 and rs4389526) and this study (rs12504282) are in strong linkage disequilibrium (r 2 ≥0.76). All are located near a putative regulatory region. Further studies are required to clarify the role played by these ANTXR2 variants in AS. … (more)
- Is Part Of:
- Annals of the rheumatic diseases. Volume 73:Issue 11(2014)
- Journal:
- Annals of the rheumatic diseases
- Issue:
- Volume 73:Issue 11(2014)
- Issue Display:
- Volume 73, Issue 11 (2014)
- Year:
- 2014
- Volume:
- 73
- Issue:
- 11
- Issue Sort Value:
- 2014-0073-0011-0000
- Page Start:
- 2054
- Page End:
- 2058
- Publication Date:
- 2014-08-28
- Subjects:
- Ankylosing Spondylitis -- Inflammation -- Gene Polymorphism -- Epidemiology -- Spondyloarthritis
Rheumatism -- Periodicals
616.723005 - Journal URLs:
- http://ard.bmjjournals.com/ ↗
http://www.pubmedcentral.nih.gov/tocrender.fcgi?journal=149&action=archive ↗
http://www.bmj.com/archive ↗
http://gateway.ovid.com/server3/ovidweb.cgi?T=JS&MODE=ovid&D=ovft&PAGE=titles&SEARCH=annals+of+the+rheumatic+diseases.tj&NEWS=N ↗ - DOI:
- 10.1136/annrheumdis-2014-205643 ↗
- Languages:
- English
- ISSNs:
- 0003-4967
- Deposit Type:
- Legaldeposit
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- Available online (eLD content is only available in our Reading Rooms) ↗
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- British Library DSC - BLDSS-3PM
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