Conformational Flexibility of A Highly Conserved Helix Controls Cryptic Pocket Formation in FtsZ. Issue 15 (23rd July 2021)

• Record Type: Journal Article
• Authors: Alnami, Aisha; Norton, Raymond S.; Pena, Helena Perez; Haider, Shozeb; Kozielski, Frank
• Is Part Of: Journal of molecular biology. Volume 433:Issue 15(2021)
• Publication Date: 2021-07-23
• Subjects: Mycobacterium tuberculosis -- FtsZ -- cryptic pockets -- coumarin -- antibacterial; Molecular biology -- Periodicals; Biology -- Periodicals; Biochemistry -- Periodicals; Bacteriology -- Periodicals; Molecular Biology -- Periodicals; Biochemistry -- Periodicals; Biologie moléculaire -- Périodiques; Biologie -- Périodiques; Biochimie -- Périodiques; Moleculaire biologie; Biochemistry; Biology; Molecular biology; Periodicals; 572.805
• DOI: 10.1016/j.jmb.2021.167061
• Languages: English
• ISSNs: 0022-2836

Abstract

Graphical abstract: Highlights: Mycobacterium tuberculosis FtsZ is a potential antibacterial target. Xray structures of Mtb FtsZ in complex with a coumarin are presented. We identify two novel inhibitor-binding cryptic pockets. Cryptic pocket formation is controlled by the dynamics of H7 helix. Abstract: Mycobacterium tuberculosis is responsible for more than 1.6 million deaths each year. One potential antibacterial target in M. tuberculosis is filamentous temperature sensitive protein Z (FtsZ), which is the bacterial homologue of mammalian tubulin, a validated cancer target. M. tuberculosis FtsZ function is essential, with its inhibition leading to arrest of cell division, elongation of the bacterial cell and eventual cell death. However, the development of potent inhibitors against FtsZ has been a challenge owing to the lack of structural information. Here we report multiple crystal structures of M. tuberculosis FtsZ in complex with a coumarin analogue. The 4-hydroxycoumarin binds exclusively to two novel cryptic pockets in nucleotide-free FtsZ, but not to the binary FtsZ-GTP or GDP complexes. Our findings provide a detailed understanding of the molecular basis for cryptic pocket formation, controlled by the conformational flexibility of the H7 helix, and thus reveal an important structural and mechanistic rationale for coumarin antibacterial activity.